(5 nodes) Mixed, incl. GTP-dependent protein binding, and Negative regulation of plant-type hypersensitive response network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_041103	RRM domain-containing protein. (282 aa)
	C5167_012882	Uncharacterized protein. (206 aa)
	C5167_048208	DUF862 domain-containing protein. (249 aa)
	C5167_003473	Epimerase domain-containing protein. (378 aa)
	C5167_047192	Epimerase domain-containing protein. (378 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_003473	C5167_012882	A0A4Y7L146	A0A4Y7J1W9	Epimerase domain-containing protein.	Uncharacterized protein.	0.560
C5167_003473	C5167_048208	A0A4Y7L146	A0A4Y7KK27	Epimerase domain-containing protein.	DUF862 domain-containing protein.	0.570
C5167_012882	C5167_003473	A0A4Y7J1W9	A0A4Y7L146	Uncharacterized protein.	Epimerase domain-containing protein.	0.560
C5167_012882	C5167_047192	A0A4Y7J1W9	A0A4Y7LI53	Uncharacterized protein.	Epimerase domain-containing protein.	0.560
C5167_047192	C5167_012882	A0A4Y7LI53	A0A4Y7J1W9	Epimerase domain-containing protein.	Uncharacterized protein.	0.560
C5167_047192	C5167_048208	A0A4Y7LI53	A0A4Y7KK27	Epimerase domain-containing protein.	DUF862 domain-containing protein.	0.570
C5167_048208	C5167_003473	A0A4Y7KK27	A0A4Y7L146	DUF862 domain-containing protein.	Epimerase domain-containing protein.	0.570
C5167_048208	C5167_047192	A0A4Y7KK27	A0A4Y7LI53	DUF862 domain-containing protein.	Epimerase domain-containing protein.	0.570