(5 nodes) U5 snRNA binding, and Brr2, N-terminal helicase PWI domain network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_040666	WD_REPEATS_REGION domain-containing protein. (345 aa)
	C5167_018415	Uncharacterized protein. (1180 aa)
	C5167_013804	EFG_C domain-containing protein. (61 aa)
	C5167_006473	Uncharacterized protein. (948 aa)
	C5167_050172	Uncharacterized protein. (2101 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_006473	C5167_013804	A0A4Y7JDJ3	A0A4Y7J5L9	Uncharacterized protein.	EFG_C domain-containing protein.	0.967
C5167_006473	C5167_018415	A0A4Y7JDJ3	A0A4Y7IR77	Uncharacterized protein.	Uncharacterized protein.	0.937
C5167_006473	C5167_040666	A0A4Y7JDJ3	A0A4Y7IFP2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.943
C5167_006473	C5167_050172	A0A4Y7JDJ3	A0A4Y7KQS6	Uncharacterized protein.	Uncharacterized protein.	0.969
C5167_013804	C5167_006473	A0A4Y7J5L9	A0A4Y7JDJ3	EFG_C domain-containing protein.	Uncharacterized protein.	0.967
C5167_013804	C5167_018415	A0A4Y7J5L9	A0A4Y7IR77	EFG_C domain-containing protein.	Uncharacterized protein.	0.966
C5167_013804	C5167_040666	A0A4Y7J5L9	A0A4Y7IFP2	EFG_C domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.961
C5167_013804	C5167_050172	A0A4Y7J5L9	A0A4Y7KQS6	EFG_C domain-containing protein.	Uncharacterized protein.	0.978
C5167_018415	C5167_006473	A0A4Y7IR77	A0A4Y7JDJ3	Uncharacterized protein.	Uncharacterized protein.	0.937
C5167_018415	C5167_013804	A0A4Y7IR77	A0A4Y7J5L9	Uncharacterized protein.	EFG_C domain-containing protein.	0.966
C5167_018415	C5167_040666	A0A4Y7IR77	A0A4Y7IFP2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.932
C5167_018415	C5167_050172	A0A4Y7IR77	A0A4Y7KQS6	Uncharacterized protein.	Uncharacterized protein.	0.982
C5167_040666	C5167_006473	A0A4Y7IFP2	A0A4Y7JDJ3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.943
C5167_040666	C5167_013804	A0A4Y7IFP2	A0A4Y7J5L9	WD_REPEATS_REGION domain-containing protein.	EFG_C domain-containing protein.	0.961
C5167_040666	C5167_018415	A0A4Y7IFP2	A0A4Y7IR77	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.932
C5167_040666	C5167_050172	A0A4Y7IFP2	A0A4Y7KQS6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.951
C5167_050172	C5167_006473	A0A4Y7KQS6	A0A4Y7JDJ3	Uncharacterized protein.	Uncharacterized protein.	0.969
C5167_050172	C5167_013804	A0A4Y7KQS6	A0A4Y7J5L9	Uncharacterized protein.	EFG_C domain-containing protein.	0.978
C5167_050172	C5167_018415	A0A4Y7KQS6	A0A4Y7IR77	Uncharacterized protein.	Uncharacterized protein.	0.982
C5167_050172	C5167_040666	A0A4Y7KQS6	A0A4Y7IFP2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.951