(21 nodes) U2AF complex, and F-box protein EID1-like network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_039440	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (547 aa)
	C5167_017028	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (443 aa)
	C5167_017957	ADF-H domain-containing protein. (198 aa)
	C5167_019362	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (546 aa)
	C5167_020399	F-box domain-containing protein. (268 aa)
	C5167_012593	X8 domain-containing protein. (350 aa)
	C5167_013931	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (572 aa)
	C5167_014438	F-box domain-containing protein. (346 aa)
	C5167_014791	DUF3700 domain-containing protein. (256 aa)
	C5167_005277	Uncharacterized protein. (268 aa)
	C5167_010739	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (532 aa)
	C5167_031394	Uncharacterized protein. (542 aa)
	C5167_033735	Protein kinase domain-containing protein. (556 aa)
	C5167_033781	Uncharacterized protein. (340 aa)
	C5167_049302	Uncharacterized protein. (237 aa)
	C5167_000974	Uncharacterized protein. (317 aa)
	C5167_000973	Uncharacterized protein. (344 aa)
	C5167_003056	Protein kinase domain-containing protein. (557 aa)
	C5167_002918	Uncharacterized protein. (168 aa)
	C5167_043245	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (560 aa)
	C5167_045136	Uncharacterized protein. (323 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_000973	C5167_000974	A0A4Y7KXK5	A0A4Y7KWP0	Uncharacterized protein.	Uncharacterized protein.	0.901
C5167_000973	C5167_002918	A0A4Y7KXK5	A0A4Y7L2T6	Uncharacterized protein.	Uncharacterized protein.	0.692
C5167_000973	C5167_010739	A0A4Y7KXK5	A0A4Y7K2J3	Uncharacterized protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.967
C5167_000973	C5167_012593	A0A4Y7KXK5	A0A4Y7IXX4	Uncharacterized protein.	X8 domain-containing protein.	0.692
C5167_000973	C5167_013931	A0A4Y7KXK5	A0A4Y7J5S8	Uncharacterized protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.967
C5167_000973	C5167_014438	A0A4Y7KXK5	A0A4Y7J6A0	Uncharacterized protein.	F-box domain-containing protein.	0.595
C5167_000973	C5167_014791	A0A4Y7KXK5	A0A4Y7J8J2	Uncharacterized protein.	DUF3700 domain-containing protein.	0.692
C5167_000973	C5167_017957	A0A4Y7KXK5	A0A4Y7IP80	Uncharacterized protein.	ADF-H domain-containing protein.	0.692
C5167_000973	C5167_019362	A0A4Y7KXK5	A0A4Y7IS22	Uncharacterized protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.967
C5167_000973	C5167_020399	A0A4Y7KXK5	A0A4Y7IW78	Uncharacterized protein.	F-box domain-containing protein.	0.595
C5167_000973	C5167_031394	A0A4Y7KXK5	A0A4Y7K7F2	Uncharacterized protein.	Uncharacterized protein.	0.426
C5167_000973	C5167_033781	A0A4Y7KXK5	A0A4Y7KFF5	Uncharacterized protein.	Uncharacterized protein.	0.901
C5167_000973	C5167_039440	A0A4Y7KXK5	A0A4Y7IFK7	Uncharacterized protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.967
C5167_000973	C5167_043245	A0A4Y7KXK5	A0A4Y7L951	Uncharacterized protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.692
C5167_000973	C5167_045136	A0A4Y7KXK5	A0A4Y7LBF1	Uncharacterized protein.	Uncharacterized protein.	0.900
C5167_000973	C5167_049302	A0A4Y7KXK5	A0A4Y7KKG0	Uncharacterized protein.	Uncharacterized protein.	0.595
C5167_000974	C5167_000973	A0A4Y7KWP0	A0A4Y7KXK5	Uncharacterized protein.	Uncharacterized protein.	0.901
C5167_000974	C5167_002918	A0A4Y7KWP0	A0A4Y7L2T6	Uncharacterized protein.	Uncharacterized protein.	0.692
C5167_000974	C5167_005277	A0A4Y7KWP0	A0A4Y7JDA7	Uncharacterized protein.	Uncharacterized protein.	0.401
C5167_000974	C5167_010739	A0A4Y7KWP0	A0A4Y7K2J3	Uncharacterized protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.967