(93 nodes) Protein domain specific binding network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_038004	Peptidylprolyl isomerase. (527 aa)
	C5167_002908	Uncharacterized protein. (409 aa)
	C5167_002977	Uncharacterized protein. (97 aa)
	C5167_002816	SRP54 domain-containing protein. (571 aa)
	C5167_001744	Uncharacterized protein. (128 aa)
	C5167_002443	Uncharacterized protein. (125 aa)
	C5167_000483	Uncharacterized protein. (214 aa)
	C5167_050279	Uncharacterized protein. (203 aa)
	C5167_049900	Lactamase_B domain-containing protein. (303 aa)
	C5167_051047	Uncharacterized protein. (276 aa)
	C5167_049509	CAAD domain-containing protein. (171 aa)
	C5167_048629	Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. (182 aa)
	C5167_048974	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (484 aa)
	C5167_049935	MSP domain-containing protein. (217 aa)
	C5167_048911	Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. (182 aa)
	C5167_012889	Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. (182 aa)
	C5167_034678	MSP domain-containing protein. (257 aa)
	C5167_034276	Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family. (171 aa)
	C5167_034193	Uncharacterized protein. (319 aa)
	C5167_033093	Uncharacterized protein. (203 aa)
	C5167_032695	CAAD domain-containing protein. (171 aa)
	C5167_032317	MSP domain-containing protein. (217 aa)
	C5167_032309	Lactamase_B domain-containing protein. (332 aa)
	C5167_011204	Uncharacterized protein. (169 aa)
	C5167_031921	Uncharacterized protein. (217 aa)
	C5167_010540	Peptidylprolyl isomerase. (523 aa)
	C5167_009185	MSP domain-containing protein. (276 aa)
	C5167_009837	Uncharacterized protein. (185 aa)
	C5167_008657	Uncharacterized protein. (111 aa)
	C5167_025577	MSP domain-containing protein. (237 aa)
	C5167_024903	Uncharacterized protein. (259 aa)
	C5167_024916	Uncharacterized protein. (209 aa)
	C5167_024917	Uncharacterized protein. (130 aa)
	C5167_024913	Uncharacterized protein. (233 aa)
	C5167_024928	Uncharacterized protein. (232 aa)
	C5167_024927	Uncharacterized protein. (269 aa)
	C5167_024911	Uncharacterized protein. (214 aa)
	C5167_024926	Uncharacterized protein. (204 aa)
	C5167_024905	Uncharacterized protein. (229 aa)
	C5167_024899	Uncharacterized protein. (212 aa)
	C5167_024915	Uncharacterized protein. (209 aa)
	C5167_024900	Uncharacterized protein. (104 aa)
	C5167_023887	Uncharacterized protein. (211 aa)
	C5167_025219	PsaL domain-containing protein. (216 aa)
	C5167_024902	Uncharacterized protein. (228 aa)
	C5167_024904	Uncharacterized protein. (216 aa)
	C5167_022782	Uncharacterized protein. (194 aa)
	C5167_022374	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (272 aa)
	C5167_006642	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (272 aa)
	C5167_005785	Uncharacterized protein. (216 aa)
	C5167_004954	Peptidase_M48 domain-containing protein. (235 aa)
	C5167_015281	Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family. (173 aa)
	C5167_015483	AAI domain-containing protein. (146 aa)
	C5167_014676	Uncharacterized protein. (243 aa)
	C5167_014333	MSP domain-containing protein. (175 aa)
	C5167_014675	Uncharacterized protein. (227 aa)
	C5167_014682	Uncharacterized protein. (229 aa)
	C5167_014512	Uncharacterized protein. (122 aa)
	C5167_013348	Uncharacterized protein. (272 aa)
	C5167_012948	Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. (182 aa)
	C5167_013002	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (485 aa)
	C5167_012298	MSP domain-containing protein. (237 aa)
	C5167_020445	Uncharacterized protein. (122 aa)
	C5167_020976	Uncharacterized protein. (203 aa)
	C5167_020867	MSP domain-containing protein. (422 aa)
	C5167_020296	MSP domain-containing protein. (202 aa)
	C5167_020140	Uncharacterized protein. (204 aa)
	C5167_020139	Uncharacterized protein. (216 aa)
	C5167_018304	Uncharacterized protein. (147 aa)
	C5167_018299	Uncharacterized protein. (162 aa)
	C5167_019183	MSP domain-containing protein. (277 aa)
	C5167_018780	AAI domain-containing protein. (154 aa)
	C5167_018305	Uncharacterized protein. (204 aa)
	C5167_017296	Uncharacterized protein. (208 aa)
	C5167_018301	Uncharacterized protein. (155 aa)
	C5167_017799	Uncharacterized protein. (122 aa)
	C5167_040789	Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. (184 aa)
	C5167_040349	Uncharacterized protein. (275 aa)
	C5167_040791	Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. (184 aa)
	C5167_040790	Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. (184 aa)
	C5167_039337	MSP domain-containing protein. (277 aa)
	C5167_038865	Uncharacterized protein. (169 aa)
	C5167_046714	Uncharacterized protein. (155 aa)
	C5167_047144	ThiC-associated domain-containing protein. (652 aa)
	C5167_046434	Uncharacterized protein. (206 aa)
	C5167_047082	Uncharacterized protein. (224 aa)
	C5167_046860	SRP54 domain-containing protein. (591 aa)
	C5167_045774	Uncharacterized protein. (117 aa)
	C5167_044045	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. (346 aa)
	C5167_043333	Uncharacterized protein. (216 aa)
	C5167_043103	MSP domain-containing protein. (277 aa)
	C5167_042906	Uncharacterized protein. (141 aa)
	C5167_003557	ThiC-associated domain-containing protein. (652 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_000483	C5167_006642	A0A4Y7KUB6	A0A4Y7JI58	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.968
C5167_000483	C5167_011204	A0A4Y7KUB6	A0A4Y7K688	Uncharacterized protein.	Uncharacterized protein.	0.889
C5167_000483	C5167_013348	A0A4Y7KUB6	A0A4Y7J3H2	Uncharacterized protein.	Uncharacterized protein.	0.527
C5167_000483	C5167_017296	A0A4Y7KUB6	A0A4Y7IMB7	Uncharacterized protein.	Uncharacterized protein.	0.963
C5167_000483	C5167_017799	A0A4Y7KUB6	A0A4Y7IKF7	Uncharacterized protein.	Uncharacterized protein.	0.514
C5167_000483	C5167_022374	A0A4Y7KUB6	A0A4Y7JKT1	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.968
C5167_000483	C5167_032695	A0A4Y7KUB6	A0A4Y7KBQ0	Uncharacterized protein.	CAAD domain-containing protein.	0.424
C5167_000483	C5167_038865	A0A4Y7KUB6	A0A4Y7IAG0	Uncharacterized protein.	Uncharacterized protein.	0.889
C5167_000483	C5167_042906	A0A4Y7KUB6	A0A4Y7L6T7	Uncharacterized protein.	Uncharacterized protein.	0.968
C5167_000483	C5167_044045	A0A4Y7KUB6	A0A4Y7LBB7	Uncharacterized protein.	Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.	0.697
C5167_000483	C5167_049509	A0A4Y7KUB6	A0A4Y7KPI9	Uncharacterized protein.	CAAD domain-containing protein.	0.424
C5167_001744	C5167_002443	A0A4Y7KZQ8	A0A4Y7KY31	Uncharacterized protein.	Uncharacterized protein.	0.538
C5167_002443	C5167_001744	A0A4Y7KY31	A0A4Y7KZQ8	Uncharacterized protein.	Uncharacterized protein.	0.538
C5167_002443	C5167_045774	A0A4Y7KY31	A0A4Y7LEM1	Uncharacterized protein.	Uncharacterized protein.	0.535
C5167_002816	C5167_002908	A0A4Y7L2N4	A0A4Y7L392	SRP54 domain-containing protein.	Uncharacterized protein.	0.651
C5167_002816	C5167_010540	A0A4Y7L2N4	A0A4Y7K4M1	SRP54 domain-containing protein.	Peptidylprolyl isomerase.	0.971
C5167_002816	C5167_038004	A0A4Y7L2N4	A0A4Y7I8B8	SRP54 domain-containing protein.	Peptidylprolyl isomerase.	0.971
C5167_002816	C5167_046860	A0A4Y7L2N4	A0A4Y7LEZ3	SRP54 domain-containing protein.	SRP54 domain-containing protein.	0.900
C5167_002908	C5167_002816	A0A4Y7L392	A0A4Y7L2N4	Uncharacterized protein.	SRP54 domain-containing protein.	0.651
C5167_002908	C5167_010540	A0A4Y7L392	A0A4Y7K4M1	Uncharacterized protein.	Peptidylprolyl isomerase.	0.931