(60 nodes) Regulation of cell population proliferation network (Papaver somniferum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_022267	BHLH domain-containing protein. (342 aa)
	C5167_043776	Uncharacterized protein. (768 aa)
	C5167_044276	F-box domain-containing protein. (419 aa)
	C5167_042757	Uncharacterized protein. (441 aa)
	C5167_043270	Uncharacterized protein. (557 aa)
	C5167_043108	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (808 aa)
	C5167_003500	Uncharacterized protein. (257 aa)
	C5167_002586	EF-hand domain-containing protein. (422 aa)
	C5167_001951	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (2245 aa)
	C5167_001627	RING-type domain-containing protein. (246 aa)
	C5167_001025	Uncharacterized protein. (425 aa)
	C5167_002305	Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. (198 aa)
	C5167_000792	C2H2-type domain-containing protein. (210 aa)
	C5167_050318	WD_REPEATS_REGION domain-containing protein. (843 aa)
	C5167_049946	DYW_deaminase domain-containing protein. (475 aa)
	C5167_035051	BHLH domain-containing protein. (368 aa)
	C5167_033411	WD_REPEATS_REGION domain-containing protein. (696 aa)
	C5167_034103	Uncharacterized protein. (768 aa)
	C5167_031836	C2H2-type domain-containing protein. (256 aa)
	C5167_031518	Homeobox domain-containing protein. (316 aa)
	C5167_010928	Uncharacterized protein. (920 aa)
	C5167_010968	Uncharacterized protein. (224 aa)
	C5167_008403	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. (1334 aa)
	C5167_024704	G-patch domain-containing protein. (393 aa)
	C5167_025693	Uncharacterized protein. (282 aa)
	C5167_023620	Uncharacterized protein. (194 aa)
	C5167_023347	Uncharacterized protein. (79 aa)
	C5167_023349	RGS domain-containing protein. (467 aa)
	C5167_007165	Uncharacterized protein. (593 aa)
	C5167_021811	Uncharacterized protein. (593 aa)
	C5167_022766	Protein kinase domain-containing protein. (1196 aa)
	C5167_006715	BHLH domain-containing protein. (339 aa)
	C5167_006849	DNA helicase; Belongs to the MCM family. (940 aa)
	C5167_005774	Uncharacterized protein; Belongs to the cytochrome P450 family. (524 aa)
	C5167_015787	BHLH domain-containing protein. (365 aa)
	C5167_005206	Uncharacterized protein. (195 aa)
	C5167_004733	PORR domain-containing protein. (503 aa)
	C5167_004495	G-patch domain-containing protein. (391 aa)
	C5167_021140	Uncharacterized protein. (400 aa)
	C5167_020007	Homeobox domain-containing protein. (618 aa)
	C5167_020709	Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1832 aa)
	C5167_019941	C2H2-type domain-containing protein. (244 aa)
	C5167_018414	Homeobox domain-containing protein. (589 aa)
	C5167_019187	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (808 aa)
	C5167_018494	C2H2-type domain-containing protein. (251 aa)
	C5167_040704	PAP_central domain-containing protein. (111 aa)
	C5167_040702	Uncharacterized protein. (442 aa)
	C5167_040703	Uncharacterized protein. (112 aa)
	C5167_039551	SP-RING-type domain-containing protein. (252 aa)
	C5167_038518	Uncharacterized protein. (915 aa)
	C5167_038600	Uncharacterized protein. (196 aa)
	C5167_036880	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. (1325 aa)
	C5167_043933	Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1829 aa)
	C5167_044134	Homeobox domain-containing protein. (543 aa)
	C5167_043825	Uncharacterized protein; Belongs to the peptidase S8 family. (770 aa)
	C5167_045203	C2H2-type domain-containing protein. (238 aa)
	C5167_045067	Uncharacterized protein. (390 aa)
	C5167_045656	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (2196 aa)
	C5167_046683	Uncharacterized protein. (427 aa)
	C5167_047164	Uncharacterized protein. (257 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_001627	C5167_005774	A0A4Y7KZE2	A0A4Y7JFA5	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.510
C5167_003500	C5167_008403	A0A4Y7L3V6	A0A4Y7JXD0	Uncharacterized protein.	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	0.739
C5167_003500	C5167_033411	A0A4Y7L3V6	A0A4Y7KE24	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.485
C5167_003500	C5167_036880	A0A4Y7L3V6	A0A4Y7I7Z1	Uncharacterized protein.	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	0.739
C5167_003500	C5167_042757	A0A4Y7L3V6	A0A4Y7L7C4	Uncharacterized protein.	Uncharacterized protein.	0.985
C5167_003500	C5167_050318	A0A4Y7L3V6	A0A4Y7KRR3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.485
C5167_005774	C5167_001627	A0A4Y7JFA5	A0A4Y7KZE2	Uncharacterized protein; Belongs to the cytochrome P450 family.	RING-type domain-containing protein.	0.510
C5167_008403	C5167_003500	A0A4Y7JXD0	A0A4Y7L3V6	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	Uncharacterized protein.	0.739
C5167_008403	C5167_033411	A0A4Y7JXD0	A0A4Y7KE24	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	WD_REPEATS_REGION domain-containing protein.	0.967
C5167_008403	C5167_042757	A0A4Y7JXD0	A0A4Y7L7C4	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	Uncharacterized protein.	0.986
C5167_008403	C5167_047164	A0A4Y7JXD0	A0A4Y7LJM8	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	Uncharacterized protein.	0.739
C5167_008403	C5167_050318	A0A4Y7JXD0	A0A4Y7KRR3	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	WD_REPEATS_REGION domain-containing protein.	0.967
C5167_033411	C5167_003500	A0A4Y7KE24	A0A4Y7L3V6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.485
C5167_033411	C5167_008403	A0A4Y7KE24	A0A4Y7JXD0	WD_REPEATS_REGION domain-containing protein.	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	0.967
C5167_033411	C5167_036880	A0A4Y7KE24	A0A4Y7I7Z1	WD_REPEATS_REGION domain-containing protein.	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	0.967
C5167_033411	C5167_042757	A0A4Y7KE24	A0A4Y7L7C4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.973
C5167_033411	C5167_047164	A0A4Y7KE24	A0A4Y7LJM8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.485
C5167_036880	C5167_003500	A0A4Y7I7Z1	A0A4Y7L3V6	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	Uncharacterized protein.	0.739
C5167_036880	C5167_033411	A0A4Y7I7Z1	A0A4Y7KE24	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	WD_REPEATS_REGION domain-containing protein.	0.967
C5167_036880	C5167_042757	A0A4Y7I7Z1	A0A4Y7L7C4	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	Uncharacterized protein.	0.986