(102 nodes) Regulation of protein catabolic process network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_011907	Uncharacterized protein. (185 aa)
	C5167_034894	DCD domain-containing protein. (312 aa)
	C5167_033103	DCD domain-containing protein. (340 aa)
	C5167_033398	SAP domain-containing protein. (165 aa)
	C5167_035647	RBR-type E3 ubiquitin transferase. (517 aa)
	C5167_033508	RBR-type E3 ubiquitin transferase. (304 aa)
	C5167_032452	RBR-type E3 ubiquitin transferase. (728 aa)
	C5167_032815	AAA domain-containing protein; Belongs to the AAA ATPase family. (448 aa)
	C5167_031648	PITH domain-containing protein. (108 aa)
	C5167_032520	Uncharacterized protein. (117 aa)
	C5167_031496	USP domain-containing protein; Belongs to the peptidase C19 family. (923 aa)
	C5167_011664	RBR-type E3 ubiquitin transferase. (828 aa)
	C5167_011437	Uncharacterized protein. (683 aa)
	C5167_011424	RBR-type E3 ubiquitin transferase. (545 aa)
	C5167_010744	RBR-type E3 ubiquitin transferase. (643 aa)
	C5167_010459	PCI domain-containing protein. (490 aa)
	C5167_025473	PCI domain-containing protein. (312 aa)
	C5167_025323	RBR-type E3 ubiquitin transferase. (589 aa)
	C5167_025340	RBR-type E3 ubiquitin transferase. (218 aa)
	C5167_022423	SAP domain-containing protein. (191 aa)
	C5167_022147	WD_REPEATS_REGION domain-containing protein. (452 aa)
	C5167_006879	WD_REPEATS_REGION domain-containing protein. (452 aa)
	C5167_006620	SAP domain-containing protein. (191 aa)
	C5167_006877	WD_REPEATS_REGION domain-containing protein. (451 aa)
	C5167_004923	WD_REPEATS_REGION domain-containing protein. (526 aa)
	C5167_004482	DDA1 domain-containing protein. (98 aa)
	C5167_015583	WD_REPEATS_REGION domain-containing protein. (348 aa)
	C5167_015805	ATPase_AAA_core domain-containing protein. (90 aa)
	C5167_004969	WD_REPEATS_REGION domain-containing protein. (453 aa)
	C5167_004833	Uncharacterized protein. (173 aa)
	C5167_014892	Uncharacterized protein. (157 aa)
	C5167_015582	WD_REPEATS_REGION domain-containing protein. (1101 aa)
	C5167_015842	AAA_lid_3 domain-containing protein. (84 aa)
	C5167_014148	F-box domain-containing protein. (396 aa)
	C5167_015459	26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1013 aa)
	C5167_015347	DCD domain-containing protein. (320 aa)
	C5167_014002	RBR-type E3 ubiquitin transferase. (556 aa)
	C5167_012843	AAA domain-containing protein; Belongs to the AAA ATPase family. (396 aa)
	C5167_012507	AAA domain-containing protein; Belongs to the AAA ATPase family. (431 aa)
	C5167_012919	RBR-type E3 ubiquitin transferase. (508 aa)
	C5167_013344	Uncharacterized protein. (204 aa)
	C5167_012832	AAA domain-containing protein; Belongs to the AAA ATPase family. (396 aa)
	C5167_012851	USP domain-containing protein; Belongs to the peptidase C19 family. (86 aa)
	C5167_020967	AAA domain-containing protein; Belongs to the AAA ATPase family. (423 aa)
	C5167_021302	Uncharacterized protein. (266 aa)
	C5167_020710	Uncharacterized protein. (90 aa)
	C5167_011886	AAA_lid_3 domain-containing protein. (69 aa)
	C5167_019587	AAA domain-containing protein; Belongs to the AAA ATPase family. (417 aa)
	C5167_019701	WD_REPEATS_REGION domain-containing protein. (454 aa)
	C5167_019023	AAA domain-containing protein; Belongs to the AAA ATPase family. (396 aa)
	C5167_018805	AAA domain-containing protein; Belongs to the AAA ATPase family. (422 aa)
	C5167_018323	Uncharacterized protein. (147 aa)
	C5167_017741	Uncharacterized protein. (462 aa)
	C5167_017500	DCD domain-containing protein. (254 aa)
	C5167_018710	WD_REPEATS_REGION domain-containing protein. (323 aa)
	C5167_041203	AAA domain-containing protein; Belongs to the AAA ATPase family. (426 aa)
	C5167_017236	Nefa_Nip30_N domain-containing protein. (209 aa)
	C5167_039142	AAA domain-containing protein; Belongs to the AAA ATPase family. (633 aa)
	C5167_040151	AAA domain-containing protein; Belongs to the AAA ATPase family. (427 aa)
	C5167_038451	RBR-type E3 ubiquitin transferase. (643 aa)
	C5167_038450	Uncharacterized protein. (467 aa)
	C5167_037930	PCI domain-containing protein. (750 aa)
	C5167_036691	RBR-type E3 ubiquitin transferase. (551 aa)
	C5167_036470	RBR-type E3 ubiquitin transferase. (443 aa)
	C5167_036697	Uncharacterized protein. (679 aa)
	C5167_047543	DCD domain-containing protein. (335 aa)
	C5167_046866	Uncharacterized protein. (322 aa)
	C5167_045407	RING-type domain-containing protein. (515 aa)
	C5167_044641	F-box domain-containing protein. (542 aa)
	C5167_045391	AAA domain-containing protein; Belongs to the AAA ATPase family. (419 aa)
	C5167_044159	F-box domain-containing protein. (432 aa)
	C5167_044112	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (477 aa)
	C5167_043586	RBR-type E3 ubiquitin transferase. (662 aa)
	C5167_044952	PCI domain-containing protein. (271 aa)
	C5167_044429	Uncharacterized protein. (91 aa)
	C5167_043340	AAA domain-containing protein; Belongs to the AAA ATPase family. (438 aa)
	C5167_043374	Uncharacterized protein. (220 aa)
	C5167_003013	RNase H domain-containing protein. (259 aa)
	C5167_002791	Uncharacterized protein. (322 aa)
	C5167_003098	WD_REPEATS_REGION domain-containing protein. (471 aa)
	C5167_002112	Uncharacterized protein. (509 aa)
	C5167_002138	AAA domain-containing protein; Belongs to the AAA ATPase family. (419 aa)
	C5167_002602	Uncharacterized protein. (283 aa)
	C5167_002853	AAA domain-containing protein. (345 aa)
	C5167_001586	ATPase_AAA_core domain-containing protein. (139 aa)
	C5167_001538	AB hydrolase-1 domain-containing protein. (192 aa)
	C5167_000754	Uncharacterized protein. (312 aa)
	C5167_000534	Rpn3_C domain-containing protein. (159 aa)
	C5167_000707	Uncharacterized protein. (570 aa)
	C5167_050175	SAP domain-containing protein. (204 aa)
	C5167_050306	F-box domain-containing protein. (139 aa)
	C5167_000685	WD_REPEATS_REGION domain-containing protein. (489 aa)
	C5167_048934	RBR-type E3 ubiquitin transferase. (496 aa)
	C5167_050164	DCD domain-containing protein. (342 aa)
	C5167_048580	WD_REPEATS_REGION domain-containing protein. (526 aa)
	C5167_049468	WD_REPEATS_REGION domain-containing protein. (294 aa)
	C5167_049533	Uncharacterized protein. (536 aa)
	C5167_035510	Uncharacterized protein. (73 aa)
	C5167_048627	WD_REPEATS_REGION domain-containing protein. (453 aa)
	C5167_035509	Uncharacterized protein. (179 aa)
	C5167_034418	WD_REPEATS_REGION domain-containing protein. (453 aa)
	C5167_047916	DDA1 domain-containing protein. (99 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_000534	C5167_001586	A0A4Y7KVT6	A0A4Y7KZC7	Rpn3_C domain-containing protein.	ATPase_AAA_core domain-containing protein.	0.917
C5167_000534	C5167_002138	A0A4Y7KVT6	A0A4Y7L0I2	Rpn3_C domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.972
C5167_000534	C5167_002853	A0A4Y7KVT6	A0A4Y7KZZ8	Rpn3_C domain-containing protein.	AAA domain-containing protein.	0.973
C5167_000534	C5167_011886	A0A4Y7KVT6	A0A4Y7IVW7	Rpn3_C domain-containing protein.	AAA_lid_3 domain-containing protein.	0.973
C5167_000534	C5167_011907	A0A4Y7KVT6	A0A4Y7J058	Rpn3_C domain-containing protein.	Uncharacterized protein.	0.426
C5167_000534	C5167_012507	A0A4Y7KVT6	A0A4Y7J1L2	Rpn3_C domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.940
C5167_000534	C5167_012832	A0A4Y7KVT6	A0A4Y7IZF0	Rpn3_C domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.853
C5167_000534	C5167_012843	A0A4Y7KVT6	A0A4Y7J1S9	Rpn3_C domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.853
C5167_000534	C5167_012851	A0A4Y7KVT6	A0A4Y7IYM9	Rpn3_C domain-containing protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.908
C5167_000534	C5167_014892	A0A4Y7KVT6	A0A4Y7J8J6	Rpn3_C domain-containing protein.	Uncharacterized protein.	0.976
C5167_000534	C5167_015459	A0A4Y7KVT6	A0A4Y7J642	Rpn3_C domain-containing protein.	26S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.976
C5167_000534	C5167_015805	A0A4Y7KVT6	A0A4Y7JA81	Rpn3_C domain-containing protein.	ATPase_AAA_core domain-containing protein.	0.917
C5167_000534	C5167_015842	A0A4Y7KVT6	A0A4Y7J764	Rpn3_C domain-containing protein.	AAA_lid_3 domain-containing protein.	0.853
C5167_000534	C5167_018805	A0A4Y7KVT6	A0A4Y7IRQ0	Rpn3_C domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.940
C5167_000534	C5167_019023	A0A4Y7KVT6	A0A4Y7IS39	Rpn3_C domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.853
C5167_000534	C5167_019587	A0A4Y7KVT6	A0A4Y7IUJ7	Rpn3_C domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.940
C5167_000534	C5167_020710	A0A4Y7KVT6	A0A4Y7IX36	Rpn3_C domain-containing protein.	Uncharacterized protein.	0.940
C5167_000534	C5167_020967	A0A4Y7KVT6	A0A4Y7IXR4	Rpn3_C domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.917
C5167_000534	C5167_031496	A0A4Y7KVT6	A0A4Y7K7P4	Rpn3_C domain-containing protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.908
C5167_000534	C5167_032815	A0A4Y7KVT6	A0A4Y7K9V0	Rpn3_C domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.973