(74 nodes) Biological process involved in symbiotic interaction network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_021000	Uncharacterized protein. (465 aa)
	C5167_033006	Uncharacterized protein. (188 aa)
	C5167_033481	Uncharacterized protein. (467 aa)
	C5167_032094	Uncharacterized protein. (293 aa)
	C5167_031910	Uncharacterized protein. (504 aa)
	C5167_033004	Uncharacterized protein. (147 aa)
	C5167_032421	Uncharacterized protein. (145 aa)
	C5167_032224	Uncharacterized protein. (184 aa)
	C5167_011059	Uncharacterized protein. (489 aa)
	C5167_009814	Uncharacterized protein. (297 aa)
	C5167_009535	OBERON-like protein; Probable transcription factor. (564 aa)
	C5167_047701	Uncharacterized protein. (304 aa)
	C5167_045718	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (215 aa)
	C5167_044641	F-box domain-containing protein. (542 aa)
	C5167_045493	Uncharacterized protein. (1437 aa)
	C5167_045344	MACPF domain-containing protein. (588 aa)
	C5167_044159	F-box domain-containing protein. (432 aa)
	C5167_025200	Uncharacterized protein. (340 aa)
	C5167_025571	Uncharacterized protein. (326 aa)
	C5167_025715	Syntaxin-6_N domain-containing protein. (397 aa)
	C5167_024401	Uncharacterized protein. (1662 aa)
	C5167_025448	RING-type E3 ubiquitin transferase. (707 aa)
	C5167_024724	N-acetyltransferase domain-containing protein. (260 aa)
	C5167_023102	Uncharacterized protein. (643 aa)
	C5167_024092	Uncharacterized protein. (294 aa)
	C5167_006990	GRAS domain-containing protein; Belongs to the GRAS family. (236 aa)
	C5167_006763	GRAS domain-containing protein; Belongs to the GRAS family. (714 aa)
	C5167_022021	GRAS domain-containing protein; Belongs to the GRAS family. (679 aa)
	C5167_049613	Uncharacterized protein. (145 aa)
	C5167_050262	Uncharacterized protein. (485 aa)
	C5167_050306	F-box domain-containing protein. (139 aa)
	C5167_000431	Nudix hydrolase domain-containing protein. (303 aa)
	C5167_001141	Nudix hydrolase domain-containing protein. (327 aa)
	C5167_000754	Uncharacterized protein. (312 aa)
	C5167_002183	MACPF domain-containing protein. (629 aa)
	C5167_001027	Uncharacterized protein. (467 aa)
	C5167_001518	Uncharacterized protein. (82 aa)
	C5167_002022	Cyclic nucleotide-binding domain-containing protein. (752 aa)
	C5167_003785	Uncharacterized protein. (225 aa)
	C5167_042338	Uncharacterized protein. (593 aa)
	C5167_043095	Cyclic nucleotide-binding domain-containing protein. (724 aa)
	C5167_043162	Uncharacterized protein. (460 aa)
	C5167_043176	MACPF domain-containing protein. (611 aa)
	C5167_044574	VASt domain-containing protein. (725 aa)
	C5167_006991	GRAS domain-containing protein; Belongs to the GRAS family. (236 aa)
	C5167_005443	Uncharacterized protein. (640 aa)
	C5167_005493	Peptidylprolyl isomerase. (264 aa)
	C5167_015683	Uncharacterized protein. (111 aa)
	C5167_014918	Uncharacterized protein. (277 aa)
	C5167_014843	N-acetyltransferase domain-containing protein. (265 aa)
	C5167_014148	F-box domain-containing protein. (396 aa)
	C5167_014916	Uncharacterized protein. (228 aa)
	C5167_014026	Uncharacterized protein. (268 aa)
	C5167_013460	Glyco_transf_24 domain-containing protein. (686 aa)
	C5167_014442	Uncharacterized protein. (329 aa)
	C5167_012232	RING-type E3 ubiquitin transferase. (714 aa)
	C5167_011982	Uncharacterized protein. (449 aa)
	C5167_012307	CUE domain-containing protein. (112 aa)
	C5167_025889	Calreticulin. (452 aa)
	C5167_049440	Uncharacterized protein. (442 aa)
	C5167_008886	MACPF domain-containing protein. (629 aa)
	C5167_038671	Uncharacterized protein. (489 aa)
	C5167_040640	Calreticulin. (429 aa)
	C5167_039351	Cyclic nucleotide-binding domain-containing protein. (714 aa)
	C5167_039687	MACPF domain-containing protein. (646 aa)
	C5167_041022	VASt domain-containing protein. (616 aa)
	C5167_017492	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (155 aa)
	C5167_017878	Uncharacterized protein. (225 aa)
	C5167_019209	Cyclic nucleotide-binding domain-containing protein. (510 aa)
	C5167_019293	Uncharacterized protein. (435 aa)
	C5167_019321	MACPF domain-containing protein. (646 aa)
	C5167_019871	Uncharacterized protein. (190 aa)
	C5167_035380	Uncharacterized protein. (339 aa)
	C5167_033577	Nudix hydrolase domain-containing protein. (320 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_003785	C5167_013460	A0A4Y7L4L3	A0A4Y7J3H4	Uncharacterized protein.	Glyco_transf_24 domain-containing protein.	0.478
C5167_003785	C5167_024401	A0A4Y7L4L3	A0A4Y7JRJ2	Uncharacterized protein.	Uncharacterized protein.	0.478
C5167_005443	C5167_023102	A0A4Y7JC97	A0A4Y7JNM8	Uncharacterized protein.	Uncharacterized protein.	0.900
C5167_013460	C5167_003785	A0A4Y7J3H4	A0A4Y7L4L3	Glyco_transf_24 domain-containing protein.	Uncharacterized protein.	0.478
C5167_013460	C5167_019871	A0A4Y7J3H4	A0A4Y7IUI3	Glyco_transf_24 domain-containing protein.	Uncharacterized protein.	0.478
C5167_013460	C5167_025889	A0A4Y7J3H4	A0A4Y7JWL7	Glyco_transf_24 domain-containing protein.	Calreticulin.	0.478
C5167_013460	C5167_040640	A0A4Y7J3H4	A0A4Y7IFJ4	Glyco_transf_24 domain-containing protein.	Calreticulin.	0.478
C5167_014843	C5167_024724	A0A4Y7J890	A0A4Y7JPA2	N-acetyltransferase domain-containing protein.	N-acetyltransferase domain-containing protein.	0.900
C5167_019871	C5167_013460	A0A4Y7IUI3	A0A4Y7J3H4	Uncharacterized protein.	Glyco_transf_24 domain-containing protein.	0.478
C5167_019871	C5167_024401	A0A4Y7IUI3	A0A4Y7JRJ2	Uncharacterized protein.	Uncharacterized protein.	0.478
C5167_023102	C5167_005443	A0A4Y7JNM8	A0A4Y7JC97	Uncharacterized protein.	Uncharacterized protein.	0.900
C5167_024401	C5167_003785	A0A4Y7JRJ2	A0A4Y7L4L3	Uncharacterized protein.	Uncharacterized protein.	0.478
C5167_024401	C5167_019871	A0A4Y7JRJ2	A0A4Y7IUI3	Uncharacterized protein.	Uncharacterized protein.	0.478
C5167_024401	C5167_025889	A0A4Y7JRJ2	A0A4Y7JWL7	Uncharacterized protein.	Calreticulin.	0.478
C5167_024401	C5167_040640	A0A4Y7JRJ2	A0A4Y7IFJ4	Uncharacterized protein.	Calreticulin.	0.478
C5167_024724	C5167_014843	A0A4Y7JPA2	A0A4Y7J890	N-acetyltransferase domain-containing protein.	N-acetyltransferase domain-containing protein.	0.900
C5167_025889	C5167_013460	A0A4Y7JWL7	A0A4Y7J3H4	Calreticulin.	Glyco_transf_24 domain-containing protein.	0.478
C5167_025889	C5167_024401	A0A4Y7JWL7	A0A4Y7JRJ2	Calreticulin.	Uncharacterized protein.	0.478
C5167_033004	C5167_033006	A0A4Y7K945	A0A4Y7KBX8	Uncharacterized protein.	Uncharacterized protein.	0.530
C5167_033006	C5167_033004	A0A4Y7KBX8	A0A4Y7K945	Uncharacterized protein.	Uncharacterized protein.	0.530