STRINGSTRING
C5167_037100 C5167_037100 C5167_011902 C5167_011902 C5167_037885 C5167_037885 C5167_038670 C5167_038670 C5167_037542 C5167_037542 C5167_038924 C5167_038924 C5167_037428 C5167_037428 C5167_038917 C5167_038917 C5167_039423 C5167_039423 LSM3 LSM3 C5167_038946 C5167_038946 C5167_040666 C5167_040666 C5167_040060 C5167_040060 C5167_016831 C5167_016831 C5167_040061 C5167_040061 C5167_041048 C5167_041048 C5167_041259 C5167_041259 C5167_017046 C5167_017046 C5167_017494 C5167_017494 C5167_017453 C5167_017453 C5167_018067 C5167_018067 C5167_018415 C5167_018415 C5167_020008 C5167_020008 C5167_018957 C5167_018957 C5167_019046 C5167_019046 C5167_019351 C5167_019351 C5167_020382 C5167_020382 C5167_021286 C5167_021286 C5167_011906 C5167_011906 C5167_012042 C5167_012042 C5167_012045 C5167_012045 C5167_012621 C5167_012621 C5167_012701 C5167_012701 C5167_012594 C5167_012594 C5167_013029 C5167_013029 C5167_013199 C5167_013199 C5167_013804 C5167_013804 C5167_005012 C5167_005012 C5167_015305 C5167_015305 C5167_005146 C5167_005146 C5167_006473 C5167_006473 C5167_005649 C5167_005649 C5167_005327 C5167_005327 C5167_006803 C5167_006803 C5167_006999 C5167_006999 C5167_006678 C5167_006678 C5167_022344 C5167_022344 C5167_022208 C5167_022208 C5167_022877 C5167_022877 C5167_023251 C5167_023251 C5167_022789 C5167_022789 C5167_024256 C5167_024256 C5167_023398 C5167_023398 C5167_023956 C5167_023956 C5167_024024 C5167_024024 C5167_023778 C5167_023778 C5167_025017 C5167_025017 C5167_024712 C5167_024712 C5167_025971 C5167_025971 C5167_008270 C5167_008270 C5167_009626 C5167_009626 C5167_009111 C5167_009111 C5167_010399 C5167_010399 C5167_010246 C5167_010246 C5167_009660 C5167_009660 C5167_010010 C5167_010010 C5167_010109 C5167_010109 C5167_011093 C5167_011093 C5167_011040 C5167_011040 C5167_031964 C5167_031964 C5167_032111 C5167_032111 C5167_032597 C5167_032597 C5167_031935 C5167_031935 C5167_033047 C5167_033047 C5167_034267 C5167_034267 C5167_034227 C5167_034227 C5167_034262 C5167_034262 C5167_034675 C5167_034675 C5167_034564 C5167_034564 C5167_034729 C5167_034729 C5167_035185 C5167_035185 C5167_049225 C5167_049225 C5167_049667 C5167_049667 C5167_050487 C5167_050487 C5167_050644 C5167_050644 C5167_050226 C5167_050226 C5167_050786 C5167_050786 C5167_001764 C5167_001764 C5167_003878 C5167_003878 C5167_001991 C5167_001991 C5167_002800 C5167_002800 C5167_001838 C5167_001838 C5167_002535 C5167_002535 C5167_002888 C5167_002888 C5167_003638 C5167_003638 C5167_020832 C5167_020832 C5167_044361 C5167_044361 C5167_044231 C5167_044231 C5167_045711 C5167_045711 C5167_045939 C5167_045939 C5167_045978 C5167_045978 C5167_045977 C5167_045977 C5167_047098 C5167_047098 C5167_046863 C5167_046863 C5167_046745 C5167_046745
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C5167_037100WD_REPEATS_REGION domain-containing protein. (299 aa)
C5167_011902Small nuclear ribonucleoprotein Sm D2. (109 aa)
C5167_037885Uncharacterized protein. (464 aa)
C5167_038670Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (133 aa)
C5167_037542WD_REPEATS_REGION domain-containing protein. (350 aa)
C5167_038924Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (116 aa)
C5167_037428Uncharacterized protein. (601 aa)
C5167_038917Small nuclear ribonucleoprotein G. (111 aa)
C5167_039423PSP domain-containing protein. (578 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
C5167_038946Matrin-type domain-containing protein. (350 aa)
C5167_040666WD_REPEATS_REGION domain-containing protein. (345 aa)
C5167_040060Uncharacterized protein. (271 aa)
C5167_016831Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (182 aa)
C5167_040061Uncharacterized protein. (370 aa)
C5167_041048MI domain-containing protein. (838 aa)
C5167_041259Uncharacterized protein. (370 aa)
C5167_017046Uncharacterized protein. (167 aa)
C5167_017494Sm domain-containing protein. (85 aa)
C5167_017453Uncharacterized protein. (330 aa)
C5167_018067PPIase cyclophilin-type domain-containing protein. (497 aa)
C5167_018415Uncharacterized protein. (1180 aa)
C5167_020008Uncharacterized protein. (378 aa)
C5167_018957Uncharacterized protein. (121 aa)
C5167_019046Uncharacterized protein. (444 aa)
C5167_019351Helicase ATP-binding domain-containing protein. (794 aa)
C5167_020382Sm domain-containing protein. (88 aa)
C5167_021286PPIase cyclophilin-type domain-containing protein. (498 aa)
C5167_011906WD_REPEATS_REGION domain-containing protein. (483 aa)
C5167_012042TPR_REGION domain-containing protein. (701 aa)
C5167_012045Uncharacterized protein. (237 aa)
C5167_012621Uncharacterized protein. (98 aa)
C5167_012701MPN domain-containing protein. (2357 aa)
C5167_012594PROCT domain-containing protein. (133 aa)
C5167_013029Pinin_SDK_memA domain-containing protein. (408 aa)
C5167_013199Helicase ATP-binding domain-containing protein. (856 aa)
C5167_013804EFG_C domain-containing protein. (61 aa)
C5167_005012Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (179 aa)
C5167_015305MI domain-containing protein. (537 aa)
C5167_005146PPIase cyclophilin-type domain-containing protein. (319 aa)
C5167_006473Uncharacterized protein. (948 aa)
C5167_005649CCHC-type domain-containing protein. (697 aa)
C5167_005327C3H1-type domain-containing protein. (326 aa)
C5167_006803Uncharacterized protein; Belongs to the DEAD box helicase family. (716 aa)
C5167_006999Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (221 aa)
C5167_006678Uncharacterized protein. (246 aa)
C5167_022344Uncharacterized protein. (247 aa)
C5167_022208Uncharacterized protein; Belongs to the DEAD box helicase family. (712 aa)
C5167_022877CCHC-type domain-containing protein. (619 aa)
C5167_023251C3H1-type domain-containing protein. (329 aa)
C5167_022789PPIase cyclophilin-type domain-containing protein. (141 aa)
C5167_024256Tr-type G domain-containing protein. (991 aa)
C5167_023398TPR_REGION domain-containing protein. (948 aa)
C5167_023956MI domain-containing protein. (751 aa)
C5167_024024Helicase C-terminal domain-containing protein. (385 aa)
C5167_023778MPN domain-containing protein. (2357 aa)
C5167_025017Helicase C-terminal domain-containing protein; Belongs to the universal ribosomal protein uS19 family. (290 aa)
C5167_024712WD_REPEATS_REGION domain-containing protein. (230 aa)
C5167_025971WD_REPEATS_REGION domain-containing protein. (345 aa)
C5167_008270Uncharacterized protein. (683 aa)
C5167_009626Matrin-type domain-containing protein. (350 aa)
C5167_009111Uncharacterized protein. (307 aa)
C5167_010399PSP domain-containing protein. (579 aa)
C5167_010246Small nuclear ribonucleoprotein Sm D2. (109 aa)
C5167_009660Small nuclear ribonucleoprotein G. (98 aa)
C5167_010010PPIase cyclophilin-type domain-containing protein. (467 aa)
C5167_010109WD_REPEATS_REGION domain-containing protein. (326 aa)
C5167_011093Helicase C-terminal domain-containing protein. (543 aa)
C5167_011040Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (180 aa)
C5167_031964Uncharacterized protein; Belongs to the DEAD box helicase family. (631 aa)
C5167_032111Tr-type G domain-containing protein. (991 aa)
C5167_032597Uncharacterized protein. (302 aa)
C5167_031935Uncharacterized protein. (371 aa)
C5167_033047TOG domain-containing protein. (1281 aa)
C5167_034267MI domain-containing protein. (573 aa)
C5167_034227MI domain-containing protein. (557 aa)
C5167_034262MI domain-containing protein. (179 aa)
C5167_034675Uncharacterized protein. (787 aa)
C5167_034564Uncharacterized protein. (170 aa)
C5167_034729TPR_REGION domain-containing protein. (747 aa)
C5167_035185WD_REPEATS_REGION domain-containing protein. (679 aa)
C5167_049225Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (119 aa)
C5167_049667PPIase cyclophilin-type domain-containing protein. (139 aa)
C5167_050487Uncharacterized protein. (789 aa)
C5167_050644Uncharacterized protein. (437 aa)
C5167_050226Uncharacterized protein. (132 aa)
C5167_050786WD_REPEATS_REGION domain-containing protein. (587 aa)
C5167_001764Uncharacterized protein. (1223 aa)
C5167_003878FTCD_N domain-containing protein. (102 aa)
C5167_001991Small nuclear ribonucleoprotein-associated protein. (277 aa)
C5167_002800Small nuclear ribonucleoprotein G. (81 aa)
C5167_001838RRM domain-containing protein. (124 aa)
C5167_002535Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (186 aa)
C5167_002888Uncharacterized protein. (951 aa)
C5167_003638Uncharacterized protein. (489 aa)
C5167_020832Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (93 aa)
C5167_044361Matrin-type domain-containing protein. (307 aa)
C5167_044231Uncharacterized protein. (374 aa)
C5167_045711Small nuclear ribonucleoprotein-associated protein. (269 aa)
C5167_045939Uncharacterized protein. (603 aa)
C5167_045978Uncharacterized protein. (517 aa)
C5167_045977SF3b1 domain-containing protein. (479 aa)
C5167_047098Uncharacterized protein. (491 aa)
C5167_046863Small nuclear ribonucleoprotein G. (81 aa)
C5167_046745Uncharacterized protein. (913 aa)
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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