(24 nodes) HAT (Half-A-TPR) repeat network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_018979	TPR_REGION domain-containing protein. (756 aa)
	C5167_019426	TPR_REGION domain-containing protein. (658 aa)
	C5167_019665	TPR_REGION domain-containing protein. (674 aa)
	C5167_012042	TPR_REGION domain-containing protein. (701 aa)
	C5167_012014	TPR_REGION domain-containing protein. (307 aa)
	C5167_012339	RRM domain-containing protein. (878 aa)
	C5167_006473	Uncharacterized protein. (948 aa)
	C5167_006289	Uncharacterized protein. (488 aa)
	C5167_023398	TPR_REGION domain-containing protein. (948 aa)
	C5167_025614	RRM domain-containing protein. (823 aa)
	C5167_009817	TPR_REGION domain-containing protein. (383 aa)
	C5167_009388	Uncharacterized protein. (656 aa)
	C5167_046745	Uncharacterized protein. (913 aa)
	C5167_045611	Uncharacterized protein. (1906 aa)
	C5167_046163	TPR_REGION domain-containing protein. (788 aa)
	C5167_003813	PCI domain-containing protein. (1008 aa)
	C5167_003331	TPR_REGION domain-containing protein. (788 aa)
	C5167_050644	Uncharacterized protein. (437 aa)
	C5167_034729	TPR_REGION domain-containing protein. (747 aa)
	C5167_031984	Uncharacterized protein. (808 aa)
	C5167_033378	Uncharacterized protein. (1139 aa)
	C5167_011343	Uncharacterized protein. (1072 aa)
	C5167_039175	Uncharacterized protein. (656 aa)
	C5167_018741	TPR_REGION domain-containing protein. (738 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_006473	C5167_012042	A0A4Y7JDJ3	A0A4Y7IX08	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.420
C5167_006473	C5167_012339	A0A4Y7JDJ3	A0A4Y7J155	Uncharacterized protein.	RRM domain-containing protein.	0.532
C5167_006473	C5167_023398	A0A4Y7JDJ3	A0A4Y7JPG8	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.900
C5167_006473	C5167_025614	A0A4Y7JDJ3	A0A4Y7JV11	Uncharacterized protein.	RRM domain-containing protein.	0.532
C5167_006473	C5167_046745	A0A4Y7JDJ3	A0A4Y7LHG3	Uncharacterized protein.	Uncharacterized protein.	0.730
C5167_009388	C5167_039175	A0A4Y7K0B3	A0A4Y7IBC7	Uncharacterized protein.	Uncharacterized protein.	0.900
C5167_009388	C5167_045611	A0A4Y7K0B3	A0A4Y7LF31	Uncharacterized protein.	Uncharacterized protein.	0.940
C5167_011343	C5167_046745	A0A4Y7K411	A0A4Y7LHG3	Uncharacterized protein.	Uncharacterized protein.	0.421
C5167_012042	C5167_006473	A0A4Y7IX08	A0A4Y7JDJ3	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.420
C5167_012042	C5167_023398	A0A4Y7IX08	A0A4Y7JPG8	TPR_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.420
C5167_012042	C5167_033378	A0A4Y7IX08	A0A4Y7KA10	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.584
C5167_012042	C5167_034729	A0A4Y7IX08	A0A4Y7KHW9	TPR_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.420
C5167_012042	C5167_046745	A0A4Y7IX08	A0A4Y7LHG3	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.999
C5167_012042	C5167_050644	A0A4Y7IX08	A0A4Y7KS07	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.467
C5167_012339	C5167_006473	A0A4Y7J155	A0A4Y7JDJ3	RRM domain-containing protein.	Uncharacterized protein.	0.532
C5167_012339	C5167_023398	A0A4Y7J155	A0A4Y7JPG8	RRM domain-containing protein.	TPR_REGION domain-containing protein.	0.532
C5167_012339	C5167_034729	A0A4Y7J155	A0A4Y7KHW9	RRM domain-containing protein.	TPR_REGION domain-containing protein.	0.532
C5167_012339	C5167_045611	A0A4Y7J155	A0A4Y7LF31	RRM domain-containing protein.	Uncharacterized protein.	0.473
C5167_012339	C5167_050644	A0A4Y7J155	A0A4Y7KS07	RRM domain-containing protein.	Uncharacterized protein.	0.532
C5167_023398	C5167_006473	A0A4Y7JPG8	A0A4Y7JDJ3	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.900