STRINGSTRING
C5167_050592 C5167_050592 C5167_036665 C5167_036665 C5167_036625 C5167_036625 C5167_036537 C5167_036537 C5167_004957 C5167_004957 C5167_004963 C5167_004963 C5167_023875 C5167_023875 C5167_011458 C5167_011458 C5167_033678 C5167_033678 C5167_034721 C5167_034721 C5167_048621 C5167_048621 C5167_001166 C5167_001166
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C5167_050592Transcription elongation factor SPT5. (1112 aa)
C5167_036665Transcription elongation factor SPT5. (1113 aa)
C5167_036625Uncharacterized protein. (732 aa)
C5167_036537Uncharacterized protein. (628 aa)
C5167_004957Uncharacterized protein. (819 aa)
C5167_004963Uncharacterized protein. (818 aa)
C5167_023875Transcription elongation factor SPT5. (1016 aa)
C5167_011458Uncharacterized protein. (1131 aa)
C5167_033678Uncharacterized protein. (824 aa)
C5167_034721Transcription elongation factor SPT5. (986 aa)
C5167_048621Uncharacterized protein. (825 aa)
C5167_001166Uncharacterized protein. (1719 aa)
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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