(26 nodes) Small GTPase superfamily, ARF/SAR type network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_035214	Uncharacterized protein. (146 aa)
	C5167_036682	Uncharacterized protein. (66 aa)
	C5167_010001	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	C5167_038314	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (192 aa)
	C5167_037401	Uncharacterized protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. (774 aa)
	C5167_040312	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (185 aa)
	C5167_017074	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	C5167_017394	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (183 aa)
	C5167_013557	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	C5167_013779	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (182 aa)
	C5167_015100	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	C5167_004759	Uncharacterized protein. (362 aa)
	C5167_005228	Uncharacterized protein. (168 aa)
	C5167_006485	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (194 aa)
	C5167_023555	Uncharacterized protein. (210 aa)
	C5167_024554	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (205 aa)
	C5167_025181	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (185 aa)
	C5167_009926	Uncharacterized protein. (156 aa)
	C5167_031675	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	C5167_032801	Uncharacterized protein. (138 aa)
	C5167_032649	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (194 aa)
	C5167_049189	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (204 aa)
	C5167_048421	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (202 aa)
	C5167_049448	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (222 aa)
	C5167_043745	Uncharacterized protein. (84 aa)
	C5167_044388	Uncharacterized protein. (155 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_005228	C5167_048421	A0A4Y7JDE7	A0A4Y7KM47	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_006485	C5167_048421	A0A4Y7JF74	A0A4Y7KM47	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_010001	C5167_048421	A0A4Y7I6N4	A0A4Y7KM47	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_013557	C5167_048421	A0A4Y7J3S1	A0A4Y7KM47	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_013779	C5167_048421	A0A4Y7J5A4	A0A4Y7KM47	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_017394	C5167_048421	A0A4Y7INE0	A0A4Y7KM47	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_023555	C5167_048421	A0A4Y7JMK9	A0A4Y7KM47	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_024554	C5167_048421	A0A4Y7JQE7	A0A4Y7KM47	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_025181	C5167_048421	A0A4Y7JQQ4	A0A4Y7KM47	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.472
C5167_032649	C5167_048421	A0A4Y7KC52	A0A4Y7KM47	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_032801	C5167_048421	A0A4Y7KA35	A0A4Y7KM47	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_035214	C5167_048421	A0A4Y7KIY6	A0A4Y7KM47	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_036682	C5167_048421	A0A4Y7I4E8	A0A4Y7KM47	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_038314	C5167_048421	A0A4Y7I958	A0A4Y7KM47	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_040312	C5167_048421	A0A4Y7II37	A0A4Y7KM47	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.472
C5167_043745	C5167_048421	A0A4Y7LAF1	A0A4Y7KM47	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_048421	C5167_005228	A0A4Y7KM47	A0A4Y7JDE7	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.581
C5167_048421	C5167_006485	A0A4Y7KM47	A0A4Y7JF74	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_048421	C5167_010001	A0A4Y7KM47	A0A4Y7I6N4	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581
C5167_048421	C5167_013557	A0A4Y7KM47	A0A4Y7J3S1	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.581