(7 nodes) CRA domain network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_037635	Uncharacterized protein. (216 aa)
	C5167_039402	CTLH domain-containing protein. (193 aa)
	C5167_013445	Uncharacterized protein. (479 aa)
	C5167_024420	Uncharacterized protein. (479 aa)
	C5167_009076	Uncharacterized protein. (252 aa)
	C5167_010188	Uncharacterized protein. (252 aa)
	C5167_046301	CTLH domain-containing protein. (411 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_009076	C5167_013445	A0A4Y7JZ98	A0A4Y7J3F7	Uncharacterized protein.	Uncharacterized protein.	0.868
C5167_009076	C5167_024420	A0A4Y7JZ98	A0A4Y7JPM5	Uncharacterized protein.	Uncharacterized protein.	0.868
C5167_009076	C5167_046301	A0A4Y7JZ98	A0A4Y7LDD4	Uncharacterized protein.	CTLH domain-containing protein.	0.778
C5167_010188	C5167_013445	A0A4Y7K0M8	A0A4Y7J3F7	Uncharacterized protein.	Uncharacterized protein.	0.868
C5167_010188	C5167_024420	A0A4Y7K0M8	A0A4Y7JPM5	Uncharacterized protein.	Uncharacterized protein.	0.868
C5167_010188	C5167_046301	A0A4Y7K0M8	A0A4Y7LDD4	Uncharacterized protein.	CTLH domain-containing protein.	0.777
C5167_013445	C5167_009076	A0A4Y7J3F7	A0A4Y7JZ98	Uncharacterized protein.	Uncharacterized protein.	0.868
C5167_013445	C5167_010188	A0A4Y7J3F7	A0A4Y7K0M8	Uncharacterized protein.	Uncharacterized protein.	0.868
C5167_013445	C5167_037635	A0A4Y7J3F7	A0A4Y7I9F8	Uncharacterized protein.	Uncharacterized protein.	0.868
C5167_013445	C5167_039402	A0A4Y7J3F7	A0A4Y7IEG5	Uncharacterized protein.	CTLH domain-containing protein.	0.868
C5167_013445	C5167_046301	A0A4Y7J3F7	A0A4Y7LDD4	Uncharacterized protein.	CTLH domain-containing protein.	0.916
C5167_024420	C5167_009076	A0A4Y7JPM5	A0A4Y7JZ98	Uncharacterized protein.	Uncharacterized protein.	0.868
C5167_024420	C5167_010188	A0A4Y7JPM5	A0A4Y7K0M8	Uncharacterized protein.	Uncharacterized protein.	0.868
C5167_024420	C5167_037635	A0A4Y7JPM5	A0A4Y7I9F8	Uncharacterized protein.	Uncharacterized protein.	0.868
C5167_024420	C5167_039402	A0A4Y7JPM5	A0A4Y7IEG5	Uncharacterized protein.	CTLH domain-containing protein.	0.868
C5167_024420	C5167_046301	A0A4Y7JPM5	A0A4Y7LDD4	Uncharacterized protein.	CTLH domain-containing protein.	0.916
C5167_037635	C5167_013445	A0A4Y7I9F8	A0A4Y7J3F7	Uncharacterized protein.	Uncharacterized protein.	0.868
C5167_037635	C5167_024420	A0A4Y7I9F8	A0A4Y7JPM5	Uncharacterized protein.	Uncharacterized protein.	0.868
C5167_037635	C5167_046301	A0A4Y7I9F8	A0A4Y7LDD4	Uncharacterized protein.	CTLH domain-containing protein.	0.777
C5167_039402	C5167_013445	A0A4Y7IEG5	A0A4Y7J3F7	CTLH domain-containing protein.	Uncharacterized protein.	0.868