(91 nodes) Immunoglobulin-like fold network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_036946	Fn3_like domain-containing protein. (769 aa)
	C5167_047003	Uncharacterized protein. (543 aa)
	C5167_046684	Aamy domain-containing protein. (844 aa)
	C5167_046077	AMPKBI domain-containing protein. (299 aa)
	C5167_045716	Uncharacterized protein. (538 aa)
	C5167_045991	Uncharacterized protein. (967 aa)
	C5167_044201	Uncharacterized protein. (522 aa)
	C5167_043426	Uncharacterized protein. (508 aa)
	C5167_043103	MSP domain-containing protein. (277 aa)
	C5167_043853	Uncharacterized protein. (423 aa)
	C5167_042300	Uncharacterized protein. (1034 aa)
	C5167_003380	AMPKBI domain-containing protein. (299 aa)
	C5167_042490	Uncharacterized protein. (571 aa)
	C5167_003529	CBM20 domain-containing protein. (434 aa)
	C5167_002416	Uncharacterized protein. (484 aa)
	C5167_002646	Uncharacterized protein. (543 aa)
	C5167_001187	Uncharacterized protein. (996 aa)
	C5167_001312	AMPK1_CBM domain-containing protein. (591 aa)
	C5167_001026	Aamy domain-containing protein. (746 aa)
	C5167_001265	Uncharacterized protein. (205 aa)
	C5167_049957	ANK_REP_REGION domain-containing protein. (476 aa)
	C5167_049873	MSP domain-containing protein. (238 aa)
	C5167_049935	MSP domain-containing protein. (217 aa)
	C5167_049331	Uncharacterized protein. (537 aa)
	C5167_035201	Uncharacterized protein. (596 aa)
	C5167_034678	MSP domain-containing protein. (257 aa)
	C5167_035072	Aamy domain-containing protein. (798 aa)
	C5167_032317	MSP domain-containing protein. (217 aa)
	C5167_032314	MSP domain-containing protein. (224 aa)
	C5167_032729	Uncharacterized protein. (537 aa)
	C5167_031904	Uncharacterized protein. (872 aa)
	C5167_031557	Uncharacterized protein. (552 aa)
	C5167_011475	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (796 aa)
	C5167_031558	Uncharacterized protein. (552 aa)
	C5167_011055	Aamy domain-containing protein. (855 aa)
	C5167_009749	Uncharacterized protein. (864 aa)
	C5167_010270	Uncharacterized protein. (547 aa)
	C5167_010712	Fn3_like domain-containing protein. (803 aa)
	C5167_009185	MSP domain-containing protein. (276 aa)
	C5167_025508	CBM20 domain-containing protein. (809 aa)
	C5167_023340	VWFA domain-containing protein. (1032 aa)
	C5167_023921	Uncharacterized protein. (885 aa)
	C5167_022492	AMPK1_CBM domain-containing protein. (519 aa)
	C5167_022112	Uncharacterized protein. (225 aa)
	C5167_023009	AMPK1_CBM domain-containing protein. (285 aa)
	C5167_021951	Uncharacterized protein. (1021 aa)
	C5167_007092	Uncharacterized protein. (1021 aa)
	C5167_006907	Aamy domain-containing protein. (908 aa)
	C5167_006866	Uncharacterized protein. (472 aa)
	C5167_006017	AMPK1_CBM domain-containing protein. (505 aa)
	C5167_015844	Uncharacterized protein. (538 aa)
	C5167_015763	Aamy domain-containing protein. (796 aa)
	C5167_005521	AMPK1_CBM domain-containing protein. (318 aa)
	C5167_015838	Uncharacterized protein. (518 aa)
	C5167_015148	CBM20 domain-containing protein. (1180 aa)
	C5167_015847	DUF1929 domain-containing protein. (127 aa)
	C5167_015845	Uncharacterized protein. (500 aa)
	C5167_015063	Uncharacterized protein. (1193 aa)
	C5167_014333	MSP domain-containing protein. (175 aa)
	C5167_014420	Uncharacterized protein. (483 aa)
	C5167_012274	CBM20 domain-containing protein. (772 aa)
	C5167_012298	MSP domain-containing protein. (237 aa)
	C5167_020780	Uncharacterized protein. (917 aa)
	C5167_008436	Fn3_like domain-containing protein. (770 aa)
	C5167_009354	Uncharacterized protein. (1143 aa)
	C5167_008217	Uncharacterized protein. (965 aa)
	C5167_025577	MSP domain-containing protein. (237 aa)
	C5167_020909	Uncharacterized protein. (495 aa)
	C5167_020856	Uncharacterized protein. (446 aa)
	C5167_020366	Uncharacterized protein. (483 aa)
	C5167_012069	Uncharacterized protein. (605 aa)
	C5167_020867	MSP domain-containing protein. (422 aa)
	C5167_011958	Ribosomal_L18e/L15P domain-containing protein. (1362 aa)
	C5167_020296	MSP domain-containing protein. (202 aa)
	C5167_019716	Uncharacterized protein. (569 aa)
	C5167_018690	Uncharacterized protein. (585 aa)
	C5167_019183	MSP domain-containing protein. (277 aa)
	C5167_017713	Fn3_like domain-containing protein. (313 aa)
	C5167_017561	Uncharacterized protein. (1105 aa)
	C5167_017715	Fn3_like domain-containing protein. (790 aa)
	C5167_017071	Uncharacterized protein. (915 aa)
	C5167_017076	Fn3_like domain-containing protein. (772 aa)
	C5167_040077	Uncharacterized protein. (329 aa)
	C5167_039014	AMPKBI domain-containing protein. (301 aa)
	C5167_039337	MSP domain-containing protein. (277 aa)
	C5167_038656	Aamy domain-containing protein. (829 aa)
	C5167_039289	Uncharacterized protein. (1132 aa)
	C5167_037143	Uncharacterized protein. (910 aa)
	C5167_036939	Fn3_like domain-containing protein. (886 aa)
	C5167_037613	N_BRCA1_IG domain-containing protein. (255 aa)
	C5167_037722	Uncharacterized protein. (545 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_001026	C5167_003529	A0A4Y7KWY6	A0A4Y7L2A4	Aamy domain-containing protein.	CBM20 domain-containing protein.	0.508
C5167_001026	C5167_009354	A0A4Y7KWY6	A0A4Y7JX55	Aamy domain-containing protein.	Uncharacterized protein.	0.909
C5167_001026	C5167_015763	A0A4Y7KWY6	A0A4Y7JAU2	Aamy domain-containing protein.	Aamy domain-containing protein.	0.421
C5167_001026	C5167_035072	A0A4Y7KWY6	A0A4Y7KEX5	Aamy domain-containing protein.	Aamy domain-containing protein.	0.421
C5167_001026	C5167_039289	A0A4Y7KWY6	A0A4Y7IBP8	Aamy domain-containing protein.	Uncharacterized protein.	0.909
C5167_001026	C5167_045991	A0A4Y7KWY6	A0A4Y7LCG6	Aamy domain-containing protein.	Uncharacterized protein.	0.823
C5167_001187	C5167_001265	A0A4Y7KYQ3	A0A4Y7KW39	Uncharacterized protein.	Uncharacterized protein.	0.441
C5167_001187	C5167_003529	A0A4Y7KYQ3	A0A4Y7L2A4	Uncharacterized protein.	CBM20 domain-containing protein.	0.508
C5167_001187	C5167_009354	A0A4Y7KYQ3	A0A4Y7JX55	Uncharacterized protein.	Uncharacterized protein.	0.897
C5167_001187	C5167_015148	A0A4Y7KYQ3	A0A4Y7J994	Uncharacterized protein.	CBM20 domain-containing protein.	0.477
C5167_001187	C5167_035201	A0A4Y7KYQ3	A0A4Y7KHZ0	Uncharacterized protein.	Uncharacterized protein.	0.477
C5167_001187	C5167_039289	A0A4Y7KYQ3	A0A4Y7IBP8	Uncharacterized protein.	Uncharacterized protein.	0.897
C5167_001187	C5167_045991	A0A4Y7KYQ3	A0A4Y7LCG6	Uncharacterized protein.	Uncharacterized protein.	0.817
C5167_001265	C5167_001187	A0A4Y7KW39	A0A4Y7KYQ3	Uncharacterized protein.	Uncharacterized protein.	0.441
C5167_001265	C5167_005521	A0A4Y7KW39	A0A4Y7JAT7	Uncharacterized protein.	AMPK1_CBM domain-containing protein.	0.466
C5167_001265	C5167_006866	A0A4Y7KW39	A0A4Y7JGB2	Uncharacterized protein.	Uncharacterized protein.	0.604
C5167_001265	C5167_014420	A0A4Y7KW39	A0A4Y7J6I5	Uncharacterized protein.	Uncharacterized protein.	0.604
C5167_001265	C5167_015148	A0A4Y7KW39	A0A4Y7J994	Uncharacterized protein.	CBM20 domain-containing protein.	0.548
C5167_001265	C5167_020366	A0A4Y7KW39	A0A4Y7IWS9	Uncharacterized protein.	Uncharacterized protein.	0.604
C5167_001265	C5167_020909	A0A4Y7KW39	A0A4Y7IXF9	Uncharacterized protein.	Uncharacterized protein.	0.604