(28 nodes) Dual specificity protein phosphatase domain network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_001014	Uncharacterized protein. (913 aa)
	C5167_039101	Uncharacterized protein. (254 aa)
	C5167_039163	Uncharacterized protein. (224 aa)
	C5167_040349	Uncharacterized protein. (275 aa)
	C5167_041004	Uncharacterized protein. (333 aa)
	C5167_018512	Uncharacterized protein. (286 aa)
	C5167_019058	Uncharacterized protein. (242 aa)
	C5167_019918	Uncharacterized protein. (287 aa)
	C5167_020800	Uncharacterized protein. (138 aa)
	C5167_004954	Peptidase_M48 domain-containing protein. (235 aa)
	C5167_006066	Uncharacterized protein. (722 aa)
	C5167_023345	Uncharacterized protein. (811 aa)
	C5167_024862	Uncharacterized protein. (288 aa)
	C5167_025218	Uncharacterized protein. (205 aa)
	C5167_009478	Uncharacterized protein. (254 aa)
	C5167_032233	Uncharacterized protein. (352 aa)
	C5167_034719	Uncharacterized protein. (680 aa)
	C5167_035201	Uncharacterized protein. (596 aa)
	C5167_050663	Uncharacterized protein. (680 aa)
	C5167_000483	Uncharacterized protein. (214 aa)
	C5167_001866	Uncharacterized protein. (360 aa)
	C5167_002859	TYR_PHOSPHATASE_2 domain-containing protein. (265 aa)
	C5167_042504	Uncharacterized protein. (946 aa)
	C5167_042936	Uncharacterized protein. (213 aa)
	C5167_042300	Uncharacterized protein. (1034 aa)
	C5167_043487	Uncharacterized protein. (179 aa)
	C5167_046836	TYR_PHOSPHATASE_2 domain-containing protein. (263 aa)
	C5167_046434	Uncharacterized protein. (206 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_018512	C5167_035201	A0A4Y7IQK8	A0A4Y7KHZ0	Uncharacterized protein.	Uncharacterized protein.	0.527
C5167_018512	C5167_042504	A0A4Y7IQK8	A0A4Y7L419	Uncharacterized protein.	Uncharacterized protein.	0.446
C5167_019918	C5167_024862	A0A4Y7IVG0	A0A4Y7JRC8	Uncharacterized protein.	Uncharacterized protein.	0.445
C5167_019918	C5167_025218	A0A4Y7IVG0	A0A4Y7JUQ8	Uncharacterized protein.	Uncharacterized protein.	0.510
C5167_019918	C5167_035201	A0A4Y7IVG0	A0A4Y7KHZ0	Uncharacterized protein.	Uncharacterized protein.	0.610
C5167_019918	C5167_042504	A0A4Y7IVG0	A0A4Y7L419	Uncharacterized protein.	Uncharacterized protein.	0.632
C5167_024862	C5167_019918	A0A4Y7JRC8	A0A4Y7IVG0	Uncharacterized protein.	Uncharacterized protein.	0.445
C5167_025218	C5167_019918	A0A4Y7JUQ8	A0A4Y7IVG0	Uncharacterized protein.	Uncharacterized protein.	0.510
C5167_025218	C5167_032233	A0A4Y7JUQ8	A0A4Y7K8C2	Uncharacterized protein.	Uncharacterized protein.	0.422
C5167_025218	C5167_035201	A0A4Y7JUQ8	A0A4Y7KHZ0	Uncharacterized protein.	Uncharacterized protein.	0.506
C5167_025218	C5167_041004	A0A4Y7JUQ8	A0A4Y7IKS4	Uncharacterized protein.	Uncharacterized protein.	0.422
C5167_025218	C5167_042504	A0A4Y7JUQ8	A0A4Y7L419	Uncharacterized protein.	Uncharacterized protein.	0.615
C5167_032233	C5167_025218	A0A4Y7K8C2	A0A4Y7JUQ8	Uncharacterized protein.	Uncharacterized protein.	0.422
C5167_032233	C5167_035201	A0A4Y7K8C2	A0A4Y7KHZ0	Uncharacterized protein.	Uncharacterized protein.	0.527
C5167_032233	C5167_042504	A0A4Y7K8C2	A0A4Y7L419	Uncharacterized protein.	Uncharacterized protein.	0.501
C5167_035201	C5167_018512	A0A4Y7KHZ0	A0A4Y7IQK8	Uncharacterized protein.	Uncharacterized protein.	0.527
C5167_035201	C5167_019918	A0A4Y7KHZ0	A0A4Y7IVG0	Uncharacterized protein.	Uncharacterized protein.	0.610
C5167_035201	C5167_025218	A0A4Y7KHZ0	A0A4Y7JUQ8	Uncharacterized protein.	Uncharacterized protein.	0.506
C5167_035201	C5167_032233	A0A4Y7KHZ0	A0A4Y7K8C2	Uncharacterized protein.	Uncharacterized protein.	0.527
C5167_035201	C5167_041004	A0A4Y7KHZ0	A0A4Y7IKS4	Uncharacterized protein.	Uncharacterized protein.	0.527