32 items (Papaver somniferum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_046265	UBA domain-containing protein. (403 aa)
	C5167_036644	Rhomboid domain-containing protein. (156 aa)
	C5167_040671	Rhomboid domain-containing protein. (271 aa)
	C5167_017272	Rhomboid domain-containing protein. (223 aa)
	C5167_019111	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (244 aa)
	C5167_018524	Uncharacterized protein. (676 aa)
	C5167_019913	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (244 aa)
	C5167_020322	Rhomboid domain-containing protein. (220 aa)
	C5167_013163	RHOMBOID-like protein. (280 aa)
	C5167_004731	RHOMBOID-like protein. (359 aa)
	C5167_007181	Rhomboid domain-containing protein. (335 aa)
	C5167_022077	Rhomboid domain-containing protein. (323 aa)
	C5167_021778	Rhomboid domain-containing protein. (294 aa)
	C5167_021866	Rhomboid domain-containing protein. (323 aa)
	C5167_008213	Uncharacterized protein. (255 aa)
	C5167_025903	Rhomboid domain-containing protein. (271 aa)
	C5167_033643	Uncharacterized protein. (307 aa)
	C5167_048391	RHOMBOID-like protein. (360 aa)
	C5167_050980	Rhomboid domain-containing protein. (353 aa)
	C5167_050977	Rhomboid domain-containing protein. (304 aa)
	C5167_000125	RHOMBOID-like protein. (400 aa)
	C5167_000511	Uncharacterized protein. (314 aa)
	C5167_001037	Uncharacterized protein. (321 aa)
	C5167_001857	UBA domain-containing protein. (292 aa)
	C5167_003296	UBA domain-containing protein. (628 aa)
	C5167_043004	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (297 aa)
	C5167_043675	Rhomboid domain-containing protein. (129 aa)
	C5167_043669	Rhomboid domain-containing protein. (327 aa)
	C5167_043668	Rhomboid domain-containing protein. (269 aa)
	C5167_045570	UBA domain-containing protein. (322 aa)
	C5167_045801	Rhomboid domain-containing protein. (242 aa)
	C5167_046617	Rhomboid domain-containing protein. (92 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_000125	C5167_001857	A0A4Y7KUI6	A0A4Y7KZ71	RHOMBOID-like protein.	UBA domain-containing protein.	0.438
C5167_000125	C5167_003296	A0A4Y7KUI6	A0A4Y7L2W8	RHOMBOID-like protein.	UBA domain-containing protein.	0.530
C5167_000125	C5167_004731	A0A4Y7KUI6	A0A4Y7JCA3	RHOMBOID-like protein.	RHOMBOID-like protein.	0.441
C5167_000125	C5167_013163	A0A4Y7KUI6	A0A4Y7J3J6	RHOMBOID-like protein.	RHOMBOID-like protein.	0.450
C5167_000125	C5167_017272	A0A4Y7KUI6	A0A4Y7IIZ3	RHOMBOID-like protein.	Rhomboid domain-containing protein.	0.617
C5167_000125	C5167_020322	A0A4Y7KUI6	A0A4Y7IWV7	RHOMBOID-like protein.	Rhomboid domain-containing protein.	0.566
C5167_000125	C5167_025903	A0A4Y7KUI6	A0A4Y7JWJ7	RHOMBOID-like protein.	Rhomboid domain-containing protein.	0.499
C5167_000125	C5167_040671	A0A4Y7KUI6	A0A4Y7IFM3	RHOMBOID-like protein.	Rhomboid domain-containing protein.	0.499
C5167_000125	C5167_043669	A0A4Y7KUI6	A0A4Y7L8Y5	RHOMBOID-like protein.	Rhomboid domain-containing protein.	0.438
C5167_000125	C5167_045570	A0A4Y7KUI6	A0A4Y7LBC5	RHOMBOID-like protein.	UBA domain-containing protein.	0.438
C5167_000125	C5167_046265	A0A4Y7KUI6	A0A4Y7LDB8	RHOMBOID-like protein.	UBA domain-containing protein.	0.530
C5167_000125	C5167_048391	A0A4Y7KUI6	A0A4Y7KL65	RHOMBOID-like protein.	RHOMBOID-like protein.	0.445
C5167_000511	C5167_013163	A0A4Y7KW61	A0A4Y7J3J6	Uncharacterized protein.	RHOMBOID-like protein.	0.448
C5167_000511	C5167_020322	A0A4Y7KW61	A0A4Y7IWV7	Uncharacterized protein.	Rhomboid domain-containing protein.	0.448
C5167_001037	C5167_003296	A0A4Y7KXU9	A0A4Y7L2W8	Uncharacterized protein.	UBA domain-containing protein.	0.421
C5167_001037	C5167_013163	A0A4Y7KXU9	A0A4Y7J3J6	Uncharacterized protein.	RHOMBOID-like protein.	0.508
C5167_001037	C5167_017272	A0A4Y7KXU9	A0A4Y7IIZ3	Uncharacterized protein.	Rhomboid domain-containing protein.	0.415
C5167_001037	C5167_020322	A0A4Y7KXU9	A0A4Y7IWV7	Uncharacterized protein.	Rhomboid domain-containing protein.	0.509
C5167_001037	C5167_025903	A0A4Y7KXU9	A0A4Y7JWJ7	Uncharacterized protein.	Rhomboid domain-containing protein.	0.431
C5167_001037	C5167_040671	A0A4Y7KXU9	A0A4Y7IFM3	Uncharacterized protein.	Rhomboid domain-containing protein.	0.431