(5 nodes) Target of rapamycin complex subunit LST8 network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_036792	WD_REPEATS_REGION domain-containing protein. (144 aa)
	C5167_042581	Uncharacterized protein. (169 aa)
	C5167_002957	WD_REPEATS_REGION domain-containing protein. (195 aa)
	C5167_000800	WD_REPEATS_REGION domain-containing protein. (336 aa)
	C5167_010432	Uncharacterized protein. (153 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_002957	C5167_010432	A0A4Y7L320	A0A4Y7K1E0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.900
C5167_002957	C5167_036792	A0A4Y7L320	A0A4Y7I8V6	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.488
C5167_010432	C5167_002957	A0A4Y7K1E0	A0A4Y7L320	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.900
C5167_036792	C5167_002957	A0A4Y7I8V6	A0A4Y7L320	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.488
C5167_036792	C5167_042581	A0A4Y7I8V6	A0A4Y7L755	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.514
C5167_042581	C5167_036792	A0A4Y7L755	A0A4Y7I8V6	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.514