(5 nodes) F-box protein EID1-like network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_008519	Prolamin_like domain-containing protein. (416 aa)
	C5167_005850	Uncharacterized protein. (295 aa)
	C5167_014438	F-box domain-containing protein. (346 aa)
	C5167_020399	F-box domain-containing protein. (268 aa)
	C5167_037034	Uncharacterized protein. (288 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_005850	C5167_014438	A0A4Y7JFX7	A0A4Y7J6A0	Uncharacterized protein.	F-box domain-containing protein.	0.510
C5167_005850	C5167_020399	A0A4Y7JFX7	A0A4Y7IW78	Uncharacterized protein.	F-box domain-containing protein.	0.510
C5167_008519	C5167_014438	A0A4Y7JYP6	A0A4Y7J6A0	Prolamin_like domain-containing protein.	F-box domain-containing protein.	0.497
C5167_008519	C5167_020399	A0A4Y7JYP6	A0A4Y7IW78	Prolamin_like domain-containing protein.	F-box domain-containing protein.	0.497
C5167_014438	C5167_005850	A0A4Y7J6A0	A0A4Y7JFX7	F-box domain-containing protein.	Uncharacterized protein.	0.510
C5167_014438	C5167_008519	A0A4Y7J6A0	A0A4Y7JYP6	F-box domain-containing protein.	Prolamin_like domain-containing protein.	0.497
C5167_014438	C5167_037034	A0A4Y7J6A0	A0A4Y7I8X0	F-box domain-containing protein.	Uncharacterized protein.	0.497
C5167_020399	C5167_005850	A0A4Y7IW78	A0A4Y7JFX7	F-box domain-containing protein.	Uncharacterized protein.	0.510
C5167_020399	C5167_008519	A0A4Y7IW78	A0A4Y7JYP6	F-box domain-containing protein.	Prolamin_like domain-containing protein.	0.497
C5167_020399	C5167_037034	A0A4Y7IW78	A0A4Y7I8X0	F-box domain-containing protein.	Uncharacterized protein.	0.497
C5167_037034	C5167_014438	A0A4Y7I8X0	A0A4Y7J6A0	Uncharacterized protein.	F-box domain-containing protein.	0.497
C5167_037034	C5167_020399	A0A4Y7I8X0	A0A4Y7IW78	Uncharacterized protein.	F-box domain-containing protein.	0.497