(8 nodes) CCR4-NOT transcription complex subunit 1 network (Papaver somniferum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C5167_025396	Uncharacterized protein. (356 aa)
	C5167_025552	Uncharacterized protein. (2240 aa)
	C5167_040672	CNOT1_TTP_bind domain-containing protein. (215 aa)
	C5167_012763	Uncharacterized protein. (218 aa)
	C5167_012294	Uncharacterized protein. (2228 aa)
	C5167_025400	Not1 domain-containing protein. (339 aa)
	C5167_031663	Uncharacterized protein. (1095 aa)
	C5167_025399	CNOT1_CAF1_bind domain-containing protein. (68 aa)

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_012294	C5167_025552	A0A4Y7J0Z7	A0A4Y7JVP9	Uncharacterized protein.	Uncharacterized protein.	0.900
C5167_025396	C5167_025399	A0A4Y7JSE5	A0A4Y7JV95	Uncharacterized protein.	CNOT1_CAF1_bind domain-containing protein.	0.528
C5167_025396	C5167_025400	A0A4Y7JSE5	A0A4Y7JRB5	Uncharacterized protein.	Not1 domain-containing protein.	0.481
C5167_025396	C5167_031663	A0A4Y7JSE5	A0A4Y7K885	Uncharacterized protein.	Uncharacterized protein.	0.518
C5167_025396	C5167_040672	A0A4Y7JSE5	A0A4Y7IFH5	Uncharacterized protein.	CNOT1_TTP_bind domain-containing protein.	0.493
C5167_025399	C5167_025396	A0A4Y7JV95	A0A4Y7JSE5	CNOT1_CAF1_bind domain-containing protein.	Uncharacterized protein.	0.528
C5167_025400	C5167_025396	A0A4Y7JRB5	A0A4Y7JSE5	Not1 domain-containing protein.	Uncharacterized protein.	0.481
C5167_025400	C5167_031663	A0A4Y7JRB5	A0A4Y7K885	Not1 domain-containing protein.	Uncharacterized protein.	0.620
C5167_025400	C5167_040672	A0A4Y7JRB5	A0A4Y7IFH5	Not1 domain-containing protein.	CNOT1_TTP_bind domain-containing protein.	0.521
C5167_025552	C5167_012294	A0A4Y7JVP9	A0A4Y7J0Z7	Uncharacterized protein.	Uncharacterized protein.	0.900
C5167_031663	C5167_025396	A0A4Y7K885	A0A4Y7JSE5	Uncharacterized protein.	Uncharacterized protein.	0.518
C5167_031663	C5167_025400	A0A4Y7K885	A0A4Y7JRB5	Uncharacterized protein.	Not1 domain-containing protein.	0.620
C5167_040672	C5167_025396	A0A4Y7IFH5	A0A4Y7JSE5	CNOT1_TTP_bind domain-containing protein.	Uncharacterized protein.	0.493
C5167_040672	C5167_025400	A0A4Y7IFH5	A0A4Y7JRB5	CNOT1_TTP_bind domain-containing protein.	Not1 domain-containing protein.	0.521