(10 nodes) Integrin alpha, N-terminal network (Anopheles melas)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A182U096	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1176 aa)
	A0A182TGL7	Uncharacterized protein. (220 aa)
	A0A182UFM2	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1143 aa)
	A0A182UFD1	Uncharacterized protein. (1025 aa)
	A0A182UE53	Uncharacterized protein. (410 aa)
	A0A182UD86	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (752 aa)
	A0A182UBB6	Uncharacterized protein. (115 aa)
	A0A182U6R1	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1281 aa)
	A0A182UGV3	Uncharacterized protein. (207 aa)
	A0A182UFN6	Uncharacterized protein. (401 aa)

Your Current Organism:

Anopheles melas

NCBI taxonomy Id: 34690
Other names: A. melas

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182TGL7	A0A182UE53	Uncharacterized protein.	Uncharacterized protein.	0.904
A0A182U096	A0A182U6R1	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.630
A0A182U096	A0A182UD86	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.659
A0A182U096	A0A182UFN6	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Uncharacterized protein.	0.612
A0A182U6R1	A0A182U096	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.630
A0A182U6R1	A0A182UD86	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.682
A0A182U6R1	A0A182UFM2	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.592
A0A182U6R1	A0A182UFN6	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Uncharacterized protein.	0.653
A0A182U6R1	A0A182UGV3	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Uncharacterized protein.	0.900
A0A182UBB6	A0A182UD86	Uncharacterized protein.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.480
A0A182UBB6	A0A182UFN6	Uncharacterized protein.	Uncharacterized protein.	0.480
A0A182UD86	A0A182U096	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.659
A0A182UD86	A0A182U6R1	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.682
A0A182UD86	A0A182UBB6	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Uncharacterized protein.	0.480
A0A182UD86	A0A182UFM2	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.648
A0A182UD86	A0A182UGV3	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Uncharacterized protein.	0.480
A0A182UE53	A0A182TGL7	Uncharacterized protein.	Uncharacterized protein.	0.904
A0A182UFM2	A0A182U6R1	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.592
A0A182UFM2	A0A182UD86	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.648
A0A182UFM2	A0A182UFN6	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Uncharacterized protein.	0.612