36 items (Trachymyrmex septentrionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC56_10665	Uncharacterized protein. (304 aa)
	ALC56_11656	Uncharacterized protein. (204 aa)
	ALC56_11633	Uncharacterized protein. (197 aa)
	ALC56_09838	Peptidase_M10 domain-containing protein. (266 aa)
	ALC56_08163	RING-type domain-containing protein. (175 aa)
	ALC56_06680	Uncharacterized protein. (243 aa)
	ALC56_05901	Uncharacterized protein. (113 aa)
	ALC56_04669	Uncharacterized protein. (219 aa)
	ALC56_04101	Uncharacterized protein. (137 aa)
	ALC56_03191	RING-type domain-containing protein. (146 aa)
	ALC56_02497	Uncharacterized protein. (225 aa)
	ALC56_00291	Uncharacterized protein. (239 aa)
	ALC56_00246	Uncharacterized protein. (303 aa)
	ALC56_15314	Matrilysin. (134 aa)
	ALC56_14234	Tripeptidyl-peptidase 2. (1264 aa)
	ALC56_12841	Furin-like protease 1, isoforms 1/1-X/2. (924 aa)
	ALC56_13085	Ig-like domain-containing protein. (389 aa)
	ALC56_12574	Nidogen-1. (1463 aa)
	ALC56_12842	Furin. (158 aa)
	ALC56_12267	Ephrin type-A receptor 4. (1025 aa)
	ALC56_10924	Relaxin receptor 1; Belongs to the G-protein coupled receptor 1 family. (696 aa)
	ALC56_09925	Uncharacterized protein. (281 aa)
	ALC56_09940	Uncharacterized protein. (253 aa)
	ALC56_09631	Death domain-containing protein. (360 aa)
	ALC56_09367	Neuroendocrine convertase 1; Belongs to the peptidase S8 family. (681 aa)
	ALC56_08567	RING-type domain-containing protein. (305 aa)
	ALC56_07991	Syntenin-1. (306 aa)
	ALC56_07660	RING finger protein 11. (171 aa)
	ALC56_06717	Ephrin-B1; Belongs to the ephrin family. (282 aa)
	ALC56_06599	Matrix metalloproteinase-14. (542 aa)
	ALC56_04482	Matrix metalloproteinase-17. (87 aa)
	ALC56_04319	Furin-like protease 2; Belongs to the peptidase S8 family. (1262 aa)
	ALC56_04479	Matrix metalloproteinase-17. (613 aa)
	ALC56_01671	Platelet glycoprotein V. (310 aa)
	ALC56_00510	RING finger protein 44. (698 aa)
	ALC56_00704	Basement membrane-specific heparan sulfate proteoglycan core protein. (3257 aa)

Your Current Organism:

Trachymyrmex septentrionalis

NCBI taxonomy Id: 34720
Other names: T. septentrionalis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC56_00246	ALC56_04319	A0A151K199	A0A195FL77	Uncharacterized protein.	Furin-like protease 2; Belongs to the peptidase S8 family.	0.611
ALC56_00246	ALC56_06599	A0A151K199	A0A195FFL2	Uncharacterized protein.	Matrix metalloproteinase-14.	0.658
ALC56_00246	ALC56_06717	A0A151K199	A0A195FE88	Uncharacterized protein.	Ephrin-B1; Belongs to the ephrin family.	0.504
ALC56_00246	ALC56_09367	A0A151K199	A0A195F891	Uncharacterized protein.	Neuroendocrine convertase 1; Belongs to the peptidase S8 family.	0.611
ALC56_00246	ALC56_12267	A0A151K199	A0A195EZ24	Uncharacterized protein.	Ephrin type-A receptor 4.	0.510
ALC56_00246	ALC56_12574	A0A151K199	A0A195EXZ6	Uncharacterized protein.	Nidogen-1.	0.548
ALC56_00246	ALC56_12841	A0A151K199	A0A195EXD5	Uncharacterized protein.	Furin-like protease 1, isoforms 1/1-X/2.	0.611
ALC56_00246	ALC56_12842	A0A151K199	A0A195EYC5	Uncharacterized protein.	Furin.	0.504
ALC56_00291	ALC56_04319	A0A151K181	A0A195FL77	Uncharacterized protein.	Furin-like protease 2; Belongs to the peptidase S8 family.	0.611
ALC56_00291	ALC56_06717	A0A151K181	A0A195FE88	Uncharacterized protein.	Ephrin-B1; Belongs to the ephrin family.	0.504
ALC56_00291	ALC56_09367	A0A151K181	A0A195F891	Uncharacterized protein.	Neuroendocrine convertase 1; Belongs to the peptidase S8 family.	0.611
ALC56_00291	ALC56_12267	A0A151K181	A0A195EZ24	Uncharacterized protein.	Ephrin type-A receptor 4.	0.510
ALC56_00291	ALC56_12574	A0A151K181	A0A195EXZ6	Uncharacterized protein.	Nidogen-1.	0.548
ALC56_00291	ALC56_12841	A0A151K181	A0A195EXD5	Uncharacterized protein.	Furin-like protease 1, isoforms 1/1-X/2.	0.611
ALC56_00291	ALC56_12842	A0A151K181	A0A195EYC5	Uncharacterized protein.	Furin.	0.504
ALC56_00510	ALC56_04319	A0A195FX84	A0A195FL77	RING finger protein 44.	Furin-like protease 2; Belongs to the peptidase S8 family.	0.798
ALC56_00510	ALC56_09367	A0A195FX84	A0A195F891	RING finger protein 44.	Neuroendocrine convertase 1; Belongs to the peptidase S8 family.	0.798
ALC56_00510	ALC56_09631	A0A195FX84	A0A195F5G5	RING finger protein 44.	Death domain-containing protein.	0.644
ALC56_00510	ALC56_10924	A0A195FX84	A0A195F2N5	RING finger protein 44.	Relaxin receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.809
ALC56_00510	ALC56_12841	A0A195FX84	A0A195EXD5	RING finger protein 44.	Furin-like protease 1, isoforms 1/1-X/2.	0.798