37 items (Trachymyrmex septentrionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC56_11799	Spermatogenesis-associated protein 13. (1051 aa)
	ALC56_11849	Major royal jelly protein 3. (633 aa)
	ALC56_09060	Protein yellow. (623 aa)
	ALC56_08137	Ras-related C3 botulinum toxin substrate 1. (195 aa)
	ALC56_07098	Protein diaphanous. (1065 aa)
	ALC56_03811	Alsin. (1535 aa)
	ALC56_15177	Uncharacterized protein. (629 aa)
	ALC56_14732	Dynein heavy chain, cytoplasmic. (3719 aa)
	ALC56_14705	Ras-like GTP-binding protein Rho1. (187 aa)
	ALC56_14750	Cdc42 like protein. (283 aa)
	ALC56_12267	Ephrin type-A receptor 4. (1025 aa)
	ALC56_12026	Cdc42 like protein. (191 aa)
	ALC56_05260	Ephexin-1. (1535 aa)
	ALC56_04688	Flotillin-2; Belongs to the band 7/mec-2 family. Flotillin subfamily. (451 aa)
	ALC56_03532	annotation not available (600 aa)
	ALC56_02938	Laccase-1. (805 aa)
	ALC56_03038	Caspase Nc; Belongs to the peptidase C14A family. (431 aa)
	ALC56_02828	Protein yellow. (400 aa)
	ALC56_01767	Ras-related protein Rac1. (192 aa)
	ALC56_01700	UPF0405 protein C3orf75 like protein. (275 aa)
	ALC56_02180	SHC-transforming protein 1. (462 aa)
	ALC56_00730	Rho-related GTP-binding protein RhoU. (285 aa)
	ALC56_01115	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (571 aa)
	ALC56_00636	Protein yellow. (194 aa)
	ALC56_11783	Neuroglian. (1251 aa)
	ALC56_11152	Phenoloxidase subunit A3. (711 aa)
	ALC56_09679	Stress-activated protein kinase JNK. (462 aa)
	ALC56_09650	Dual specificity mitogen-activated protein kinase kinase 7. (825 aa)
	ALC56_09765	Uncharacterized protein. (918 aa)
	ALC56_09237	Tyrocidine synthase 3. (943 aa)
	ALC56_07649	Uncharacterized protein. (115 aa)
	ALC56_07996	Ras-like GTP-binding protein RhoL. (189 aa)
	ALC56_07648	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (601 aa)
	ALC56_06879	Laminin subunit alpha. (3668 aa)
	ALC56_06717	Ephrin-B1; Belongs to the ephrin family. (282 aa)
	ALC56_06425	Protein vav. (841 aa)
	ALC56_06040	Rho-related BTB domain-containing protein 2. (744 aa)

Your Current Organism:

Trachymyrmex septentrionalis

NCBI taxonomy Id: 34720
Other names: T. septentrionalis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC56_00636	ALC56_09060	A0A195FYS8	A0A151JUT2	Protein yellow.	Protein yellow.	0.402
ALC56_00636	ALC56_09679	A0A195FYS8	A0A195F5Z1	Protein yellow.	Stress-activated protein kinase JNK.	0.418
ALC56_00636	ALC56_11849	A0A195FYS8	A0A151JTG0	Protein yellow.	Major royal jelly protein 3.	0.576
ALC56_00730	ALC56_02180	A0A195FVR9	A0A195FU91	Rho-related GTP-binding protein RhoU.	SHC-transforming protein 1.	0.648
ALC56_00730	ALC56_03532	A0A195FVR9	A0A195FPW0	Rho-related GTP-binding protein RhoU.	annotation not available	0.644
ALC56_00730	ALC56_03811	A0A195FVR9	A0A151JZ26	Rho-related GTP-binding protein RhoU.	Alsin.	0.811
ALC56_00730	ALC56_04688	A0A195FVR9	A0A195FK69	Rho-related GTP-binding protein RhoU.	Flotillin-2; Belongs to the band 7/mec-2 family. Flotillin subfamily.	0.525
ALC56_00730	ALC56_05260	A0A195FVR9	A0A195FHZ5	Rho-related GTP-binding protein RhoU.	Ephexin-1.	0.728
ALC56_00730	ALC56_06425	A0A195FVR9	A0A195FG48	Rho-related GTP-binding protein RhoU.	Protein vav.	0.913
ALC56_00730	ALC56_06717	A0A195FVR9	A0A195FE88	Rho-related GTP-binding protein RhoU.	Ephrin-B1; Belongs to the ephrin family.	0.676
ALC56_00730	ALC56_07098	A0A195FVR9	A0A151JW76	Rho-related GTP-binding protein RhoU.	Protein diaphanous.	0.895
ALC56_00730	ALC56_07648	A0A195FVR9	A0A195FDA6	Rho-related GTP-binding protein RhoU.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.745
ALC56_00730	ALC56_07649	A0A195FVR9	A0A195FBM4	Rho-related GTP-binding protein RhoU.	Uncharacterized protein.	0.745
ALC56_00730	ALC56_07996	A0A195FVR9	A0A195FC68	Rho-related GTP-binding protein RhoU.	Ras-like GTP-binding protein RhoL.	0.523
ALC56_00730	ALC56_09650	A0A195FVR9	A0A195F713	Rho-related GTP-binding protein RhoU.	Dual specificity mitogen-activated protein kinase kinase 7.	0.631
ALC56_00730	ALC56_09679	A0A195FVR9	A0A195F5Z1	Rho-related GTP-binding protein RhoU.	Stress-activated protein kinase JNK.	0.816
ALC56_00730	ALC56_11799	A0A195FVR9	A0A195F086	Rho-related GTP-binding protein RhoU.	Spermatogenesis-associated protein 13.	0.881
ALC56_00730	ALC56_12267	A0A195FVR9	A0A195EZ24	Rho-related GTP-binding protein RhoU.	Ephrin type-A receptor 4.	0.775
ALC56_00730	ALC56_14705	A0A195FVR9	A0A195ERP2	Rho-related GTP-binding protein RhoU.	Ras-like GTP-binding protein Rho1.	0.906
ALC56_01115	ALC56_03038	A0A195FVT4	A0A195FQC7	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	Caspase Nc; Belongs to the peptidase C14A family.	0.606