47 items (Trachymyrmex septentrionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC56_13880	Methenyltetrahydrofolate synthase domain-containing protein. (475 aa)
	ALC56_04362	Cell cycle regulator Mat89Bb like protein. (678 aa)
	ALC56_04369	Myelin expression factor 2. (631 aa)
	ALC56_04225	Cytoskeleton-associated protein 5. (1985 aa)
	ALC56_04532	RNA-binding protein squid. (347 aa)
	ALC56_04863	RNA-binding protein squid. (299 aa)
	ALC56_04896	Protein CASC3. (792 aa)
	ALC56_06856	DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. (340 aa)
	ALC56_06822	Vacuolar protein-sorting-associated protein 25. (175 aa)
	ALC56_08968	Clathrin heavy chain. (1664 aa)
	ALC56_09364	Heterogeneous nuclear ribonucleoprotein 27C. (431 aa)
	ALC56_10892	Cytoplasmic polyadenylation element-binding protein 1-B. (705 aa)
	ALC56_10689	Maternal protein exuperantia. (416 aa)
	ALC56_10800	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (251 aa)
	ALC56_10849	mRNA-decapping enzyme 2. (459 aa)
	ALC56_10643	Vacuolar protein-sorting-associated protein 36. (402 aa)
	ALC56_11463	DNA repair protein XRCC3. (252 aa)
	ALC56_11577	Gamma-tubulin complex component. (584 aa)
	ALC56_11938	Heterogeneous nuclear ribonucleoprotein F. (393 aa)
	ALC56_02071	Uncharacterized protein. (398 aa)
	ALC56_12377	Non-specific serine/threonine protein kinase. (857 aa)
	ALC56_12832	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (157 aa)
	ALC56_13249	Exonuclease 3'-5' domain-containing protein 1. (832 aa)
	ALC56_13312	Protein bicaudal D. (765 aa)
	ALC56_13664	Merlin. (630 aa)
	ALC56_14008	Eukaryotic translation initiation factor 4E transporter. (1303 aa)
	ALC56_14313	Maternal protein tudor. (2624 aa)
	ALC56_14170	Small nuclear ribonucleoprotein Sm D3. (142 aa)
	ALC56_14347	Double-stranded RNA-binding protein Staufen like protein 2. (806 aa)
	ALC56_14169	Small nuclear ribonucleoprotein Sm D3. (142 aa)
	ALC56_14795	Enhancer of mRNA-decapping protein 4. (1074 aa)
	ALC56_14732	Dynein heavy chain, cytoplasmic. (3719 aa)
	ALC56_00088	Casein kinase II subunit alpha. (153 aa)
	ALC56_00043	Small nuclear ribonucleoprotein Sm D3. (96 aa)
	ALC56_00087	Amyloid protein-binding protein 2. (102 aa)
	ALC56_02317	Amyloid protein-binding protein 2. (265 aa)
	ALC56_02318	Amyloid protein-binding protein 2. (128 aa)
	ALC56_07475	Ras-related protein Rab-6A. (211 aa)
	ALC56_07131	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (350 aa)
	ALC56_08173	Eukaryotic initiation factor 4A-III. (407 aa)
	ALC56_11830	Gamma-tubulin complex component. (1029 aa)
	ALC56_03470	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. (621 aa)
	ALC56_02687	Rabenosyn-5. (512 aa)
	ALC56_03732	Transcription factor BTF3; Belongs to the NAC-beta family. (186 aa)
	ALC56_00897	Amyloid protein-binding protein 2. (584 aa)
	ALC56_02072	Protein cappuccino. (1277 aa)
	ALC56_02205	Protein mago nashi. (146 aa)

Your Current Organism:

Trachymyrmex septentrionalis

NCBI taxonomy Id: 34720
Other names: T. septentrionalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC56_00043	ALC56_02205	A0A151K3L8	A0A195FUB8	Small nuclear ribonucleoprotein Sm D3.	Protein mago nashi.	0.797
ALC56_00043	ALC56_03470	A0A151K3L8	A0A195FPV0	Small nuclear ribonucleoprotein Sm D3.	Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.	0.794
ALC56_00043	ALC56_04369	A0A151K3L8	A0A195FLD0	Small nuclear ribonucleoprotein Sm D3.	Myelin expression factor 2.	0.904
ALC56_00043	ALC56_04896	A0A151K3L8	A0A195FJZ9	Small nuclear ribonucleoprotein Sm D3.	Protein CASC3.	0.680
ALC56_00043	ALC56_08173	A0A151K3L8	A0A151JVP6	Small nuclear ribonucleoprotein Sm D3.	Eukaryotic initiation factor 4A-III.	0.908
ALC56_00043	ALC56_12832	A0A151K3L8	A0A195EYB5	Small nuclear ribonucleoprotein Sm D3.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.755
ALC56_00087	ALC56_00088	A0A151K3L3	A0A151K3Y8	Amyloid protein-binding protein 2.	Casein kinase II subunit alpha.	0.485
ALC56_00087	ALC56_04362	A0A151K3L3	A0A195FLJ9	Amyloid protein-binding protein 2.	Cell cycle regulator Mat89Bb like protein.	0.671
ALC56_00087	ALC56_07131	A0A151K3L3	A0A151JW70	Amyloid protein-binding protein 2.	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	0.485
ALC56_00088	ALC56_00087	A0A151K3Y8	A0A151K3L3	Casein kinase II subunit alpha.	Amyloid protein-binding protein 2.	0.485
ALC56_00088	ALC56_00897	A0A151K3Y8	A0A195FWU6	Casein kinase II subunit alpha.	Amyloid protein-binding protein 2.	0.485
ALC56_00088	ALC56_02317	A0A151K3Y8	A0A151K0I1	Casein kinase II subunit alpha.	Amyloid protein-binding protein 2.	0.485
ALC56_00088	ALC56_02318	A0A151K3Y8	A0A151K0C3	Casein kinase II subunit alpha.	Amyloid protein-binding protein 2.	0.485
ALC56_00088	ALC56_14008	A0A151K3Y8	A0A195EVF7	Casein kinase II subunit alpha.	Eukaryotic translation initiation factor 4E transporter.	0.463
ALC56_00897	ALC56_00088	A0A195FWU6	A0A151K3Y8	Amyloid protein-binding protein 2.	Casein kinase II subunit alpha.	0.485
ALC56_00897	ALC56_04362	A0A195FWU6	A0A195FLJ9	Amyloid protein-binding protein 2.	Cell cycle regulator Mat89Bb like protein.	0.671
ALC56_00897	ALC56_07131	A0A195FWU6	A0A151JW70	Amyloid protein-binding protein 2.	Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.	0.485
ALC56_02205	ALC56_00043	A0A195FUB8	A0A151K3L8	Protein mago nashi.	Small nuclear ribonucleoprotein Sm D3.	0.797
ALC56_02205	ALC56_04369	A0A195FUB8	A0A195FLD0	Protein mago nashi.	Myelin expression factor 2.	0.786
ALC56_02205	ALC56_04896	A0A195FUB8	A0A195FJZ9	Protein mago nashi.	Protein CASC3.	0.992