STRINGSTRING
ALC56_11818 ALC56_11818 ALC56_09977 ALC56_09977 ALC56_02531 ALC56_02531 ALC56_13257 ALC56_13257 ALC56_12187 ALC56_12187 ALC56_12170 ALC56_12170 ALC56_10170 ALC56_10170 ALC56_06770 ALC56_06770 ALC56_04537 ALC56_04537 ALC56_03503 ALC56_03503 ALC56_01898 ALC56_01898
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC56_11818Ubiquitin-40S ribosomal protein S27a. (156 aa)
ALC56_09977Polyubiquitin-A. (686 aa)
ALC56_02531Ubiquitin-like domain-containing protein. (246 aa)
ALC56_13257Polyubiquitin-A. (459 aa)
ALC56_12187Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (143 aa)
ALC56_12170Gamma-aminobutyric acid receptor-associated protein. (117 aa)
ALC56_10170Gamma-glutamylcyclotransferase. (170 aa)
ALC56_06770Small ubiquitin-related modifier. (87 aa)
ALC56_04537Small ubiquitin-related modifier. (126 aa)
ALC56_03503Ubiquitin-related modifier 1 homolog; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3/UBA4 homolog. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxid [...] (100 aa)
ALC56_01898Ubiquitin-60S ribosomal protein L40. (128 aa)
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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