13 items (Trachymyrmex septentrionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC56_08968	Clathrin heavy chain. (1664 aa)
	ALC56_01108	Uncharacterized protein. (209 aa)
	ALC56_01263	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (217 aa)
	ALC56_01105	Uncharacterized protein. (447 aa)
	ALC56_01027	E3 ubiquitin-protein ligase Su(Dx). (1185 aa)
	ALC56_07477	Beta-arrestin-1. (416 aa)
	ALC56_15146	Arrestin, lateral eye. (536 aa)
	ALC56_11317	Arrestin like protein. (405 aa)
	ALC56_10319	Ras-related protein Ral-a. (201 aa)
	ALC56_10340	E3 ubiquitin-protein ligase. (858 aa)
	ALC56_10572	Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded. (801 aa)
	ALC56_09676	Low density lipoprotein receptor adapter protein 1. (359 aa)
	ALC56_06155	Arrestin like protein. (379 aa)

Your Current Organism:

Trachymyrmex septentrionalis

NCBI taxonomy Id: 34720
Other names: T. septentrionalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC56_01027	ALC56_08968	A0A195FXL4	A0A195FAE3	E3 ubiquitin-protein ligase Su(Dx).	Clathrin heavy chain.	0.808
ALC56_01027	ALC56_10340	A0A195FXL4	A0A195F449	E3 ubiquitin-protein ligase Su(Dx).	E3 ubiquitin-protein ligase.	0.907
ALC56_01027	ALC56_10572	A0A195FXL4	A0A195F4K1	E3 ubiquitin-protein ligase Su(Dx).	Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded.	0.822
ALC56_01263	ALC56_08968	A0A195FVG8	A0A195FAE3	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Clathrin heavy chain.	0.416
ALC56_01263	ALC56_10319	A0A195FVG8	A0A195F3I9	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Ras-related protein Ral-a.	0.449
ALC56_06155	ALC56_08968	A0A195FG43	A0A195FAE3	Arrestin like protein.	Clathrin heavy chain.	0.963
ALC56_06155	ALC56_10319	A0A195FG43	A0A195F3I9	Arrestin like protein.	Ras-related protein Ral-a.	0.608
ALC56_06155	ALC56_11317	A0A195FG43	A0A195F1F6	Arrestin like protein.	Arrestin like protein.	0.921
ALC56_06155	ALC56_15146	A0A195FG43	A0A195EQ91	Arrestin like protein.	Arrestin, lateral eye.	0.710
ALC56_07477	ALC56_08968	A0A151JVY0	A0A195FAE3	Beta-arrestin-1.	Clathrin heavy chain.	0.963
ALC56_07477	ALC56_10319	A0A151JVY0	A0A195F3I9	Beta-arrestin-1.	Ras-related protein Ral-a.	0.608
ALC56_07477	ALC56_11317	A0A151JVY0	A0A195F1F6	Beta-arrestin-1.	Arrestin like protein.	0.626
ALC56_07477	ALC56_15146	A0A151JVY0	A0A195EQ91	Beta-arrestin-1.	Arrestin, lateral eye.	0.859
ALC56_08968	ALC56_01027	A0A195FAE3	A0A195FXL4	Clathrin heavy chain.	E3 ubiquitin-protein ligase Su(Dx).	0.808
ALC56_08968	ALC56_01263	A0A195FAE3	A0A195FVG8	Clathrin heavy chain.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.416
ALC56_08968	ALC56_06155	A0A195FAE3	A0A195FG43	Clathrin heavy chain.	Arrestin like protein.	0.963
ALC56_08968	ALC56_07477	A0A195FAE3	A0A151JVY0	Clathrin heavy chain.	Beta-arrestin-1.	0.963
ALC56_08968	ALC56_09676	A0A195FAE3	A0A195F5L7	Clathrin heavy chain.	Low density lipoprotein receptor adapter protein 1.	0.803
ALC56_08968	ALC56_10319	A0A195FAE3	A0A195F3I9	Clathrin heavy chain.	Ras-related protein Ral-a.	0.629
ALC56_08968	ALC56_10340	A0A195FAE3	A0A195F449	Clathrin heavy chain.	E3 ubiquitin-protein ligase.	0.805