59 items (Trachymyrmex septentrionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC56_02487	Arrestin domain-containing protein 3. (401 aa)
	ALC56_01569	Hsp70-binding protein 1. (378 aa)
	ALC56_11818	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	ALC56_01564	Male-specific lethal 1-like 1. (845 aa)
	ALC56_01898	Ubiquitin-60S ribosomal protein L40. (128 aa)
	ALC56_02053	Ubiquitin-conjugating enzyme E2 J1. (266 aa)
	ALC56_03507	Ubiquitin-conjugating enzyme E2-22 kDa; Belongs to the ubiquitin-conjugating enzyme family. (237 aa)
	ALC56_02952	Ubiquitin fusion degradation protein 1 like protein. (303 aa)
	ALC56_03271	Uncharacterized protein. (148 aa)
	ALC56_03585	Cullin-4B; Belongs to the cullin family. (849 aa)
	ALC56_04920	Septin-1; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (382 aa)
	ALC56_05680	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration. (787 aa)
	ALC56_05664	Transcription elongation factor B polypeptide 2. (247 aa)
	ALC56_06002	Wolframin. (845 aa)
	ALC56_06081	X-ray repair cross-complementing protein 5. (780 aa)
	ALC56_06029	Uncharacterized protein. (1329 aa)
	ALC56_06043	RING finger protein 37. (499 aa)
	ALC56_06838	Axin-1. (816 aa)
	ALC56_06811	Protein peanut; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (773 aa)
	ALC56_06466	Anaphase-promoting complex subunit 2; Belongs to the cullin family. (775 aa)
	ALC56_06456	Transcription elongation factor B polypeptide 2. (154 aa)
	ALC56_07357	UBX domain-containing protein 7. (675 aa)
	ALC56_08965	DET1 like protein. (555 aa)
	ALC56_09799	Proliferation-associated protein 2G4. (386 aa)
	ALC56_10150	Nuclear protein localization protein 4 like protein. (583 aa)
	ALC56_09669	Calcyclin-binding protein. (145 aa)
	ALC56_10271	Microtubule-associated proteins 1A/1B light chain 3A. (207 aa)
	ALC56_10170	Gamma-glutamylcyclotransferase. (170 aa)
	ALC56_10148	Nuclear protein localization protein 4 like protein. (281 aa)
	ALC56_10480	Arrestin domain-containing protein 3. (322 aa)
	ALC56_11034	Erlin-1. (344 aa)
	ALC56_11364	Activating molecule in BECN1-regulated autophagy protein 1. (2168 aa)
	ALC56_11574	JNK1/MAPK8-associated membrane protein. (381 aa)
	ALC56_11528	E3 ubiquitin-protein ligase RAD18. (670 aa)
	ALC56_11759	E3 ubiquitin-protein ligase TRIM37. (1078 aa)
	ALC56_12156	Cullin-2; Belongs to the cullin family. (760 aa)
	ALC56_12083	Cullin-1; Belongs to the cullin family. (777 aa)
	ALC56_03957	Golgin-45. (414 aa)
	ALC56_09977	Polyubiquitin-A. (686 aa)
	ALC56_12170	Gamma-aminobutyric acid receptor-associated protein. (117 aa)
	ALC56_12558	Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family. (269 aa)
	ALC56_12435	Cullin-3; Belongs to the cullin family. (773 aa)
	ALC56_12437	Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family. (159 aa)
	ALC56_12567	Arrestin domain-containing protein 3. (685 aa)
	ALC56_12973	Protein roadkill. (105 aa)
	ALC56_13271	Kinesin-like protein costa. (849 aa)
	ALC56_12972	Protein roadkill. (340 aa)
	ALC56_13257	Polyubiquitin-A. (459 aa)
	ALC56_13702	Speckle-type POZ protein. (368 aa)
	ALC56_13700	Speckle-type POZ protein. (357 aa)
	ALC56_13701	Speckle-type POZ protein. (358 aa)
	ALC56_14280	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (247 aa)
	ALC56_14731	Apoptosis inhibitor IAP. (385 aa)
	ALC56_14721	Apoptosis inhibitor IAP. (343 aa)
	ALC56_14729	Apoptosis 2 inhibitor. (587 aa)
	ALC56_14745	Apoptosis inhibitor IAP. (239 aa)
	ALC56_14730	Apoptosis 1 inhibitor. (331 aa)
	ALC56_00078	Ubiquitin fusion degradation protein 1 like protein. (207 aa)
	ALC56_01205	Cullin-5; Belongs to the cullin family. (800 aa)

Your Current Organism:

Trachymyrmex septentrionalis

NCBI taxonomy Id: 34720
Other names: T. septentrionalis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC56_00078	ALC56_01898	A0A151K3X7	A0A195FT85	Ubiquitin fusion degradation protein 1 like protein.	Ubiquitin-60S ribosomal protein L40.	0.895
ALC56_00078	ALC56_02053	A0A151K3X7	A0A195FT62	Ubiquitin fusion degradation protein 1 like protein.	Ubiquitin-conjugating enzyme E2 J1.	0.420
ALC56_00078	ALC56_06043	A0A151K3X7	A0A195FFS1	Ubiquitin fusion degradation protein 1 like protein.	RING finger protein 37.	0.863
ALC56_00078	ALC56_07357	A0A151K3X7	A0A195FDN8	Ubiquitin fusion degradation protein 1 like protein.	UBX domain-containing protein 7.	0.999
ALC56_00078	ALC56_09977	A0A151K3X7	A0A151JU99	Ubiquitin fusion degradation protein 1 like protein.	Polyubiquitin-A.	0.960
ALC56_00078	ALC56_10148	A0A151K3X7	A0A195F4T0	Ubiquitin fusion degradation protein 1 like protein.	Nuclear protein localization protein 4 like protein.	0.979
ALC56_00078	ALC56_10150	A0A151K3X7	A0A195F5Z0	Ubiquitin fusion degradation protein 1 like protein.	Nuclear protein localization protein 4 like protein.	0.982
ALC56_00078	ALC56_10170	A0A151K3X7	A0A195F4U9	Ubiquitin fusion degradation protein 1 like protein.	Gamma-glutamylcyclotransferase.	0.905
ALC56_00078	ALC56_11818	A0A151K3X7	A0A151JTF5	Ubiquitin fusion degradation protein 1 like protein.	Ubiquitin-40S ribosomal protein S27a.	0.951
ALC56_00078	ALC56_12083	A0A151K3X7	A0A195EZ15	Ubiquitin fusion degradation protein 1 like protein.	Cullin-1; Belongs to the cullin family.	0.712
ALC56_00078	ALC56_12435	A0A151K3X7	A0A195EYT1	Ubiquitin fusion degradation protein 1 like protein.	Cullin-3; Belongs to the cullin family.	0.724
ALC56_00078	ALC56_13257	A0A151K3X7	A0A195EVV9	Ubiquitin fusion degradation protein 1 like protein.	Polyubiquitin-A.	0.960
ALC56_00078	ALC56_14280	A0A151K3X7	A0A195EU44	Ubiquitin fusion degradation protein 1 like protein.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.713
ALC56_01205	ALC56_02053	A0A151K0Z8	A0A195FT62	Cullin-5; Belongs to the cullin family.	Ubiquitin-conjugating enzyme E2 J1.	0.552
ALC56_01205	ALC56_03507	A0A151K0Z8	A0A195FR34	Cullin-5; Belongs to the cullin family.	Ubiquitin-conjugating enzyme E2-22 kDa; Belongs to the ubiquitin-conjugating enzyme family.	0.581
ALC56_01205	ALC56_03585	A0A151K0Z8	A0A195FNM7	Cullin-5; Belongs to the cullin family.	Cullin-4B; Belongs to the cullin family.	0.609
ALC56_01205	ALC56_05664	A0A151K0Z8	A0A195FHP0	Cullin-5; Belongs to the cullin family.	Transcription elongation factor B polypeptide 2.	0.986
ALC56_01205	ALC56_06456	A0A151K0Z8	A0A195FEC4	Cullin-5; Belongs to the cullin family.	Transcription elongation factor B polypeptide 2.	0.986
ALC56_01205	ALC56_09977	A0A151K0Z8	A0A151JU99	Cullin-5; Belongs to the cullin family.	Polyubiquitin-A.	0.828
ALC56_01205	ALC56_10170	A0A151K0Z8	A0A195F4U9	Cullin-5; Belongs to the cullin family.	Gamma-glutamylcyclotransferase.	0.828