34 items (Trachymyrmex septentrionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC56_07999	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3. (184 aa)
	ALC56_08818	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (194 aa)
	ALC56_08595	FAD-dependent oxidoreductase domain-containing protein 1. (510 aa)
	ALC56_08598	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9; Belongs to the complex I LYR family. (144 aa)
	ALC56_08596	Uncharacterized protein. (365 aa)
	ALC56_09218	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial; Belongs to the complex I 20 kDa subunit family. (224 aa)
	ALC56_10158	Uncharacterized protein. (206 aa)
	ALC56_10708	Uncharacterized protein. (357 aa)
	ALC56_11300	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (142 aa)
	ALC56_11245	Iron-sulfur protein NUBPL. (269 aa)
	ALC56_11475	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2. (92 aa)
	ALC56_11299	Uncharacterized protein. (306 aa)
	ALC56_11595	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1. (65 aa)
	ALC56_12196	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial. (179 aa)
	ALC56_11943	Uncharacterized protein. (110 aa)
	ALC56_12089	Uncharacterized protein. (206 aa)
	ALC56_12699	Protein NDUFAF4 like protein. (202 aa)
	ALC56_13129	NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial. (207 aa)
	ALC56_12962	Uncharacterized protein. (152 aa)
	ALC56_13125	Uncharacterized protein. (140 aa)
	ALC56_13932	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13. (153 aa)
	ALC56_14492	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial. (186 aa)
	ALC56_15223	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial. (177 aa)
	ALC56_00250	Putative complex I intermediate-associated protein 30, mitochondrial. (297 aa)
	ALC56_03827	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6; Belongs to the complex I LYR family. (122 aa)
	ALC56_06664	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial. (414 aa)
	ALC56_09465	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10. (159 aa)
	ALC56_15058	Uncharacterized protein. (113 aa)
	ALC56_05413	Uncharacterized protein. (224 aa)
	ALC56_02838	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial. (106 aa)
	ALC56_01865	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (171 aa)
	ALC56_00770	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7. (121 aa)
	ALC56_01593	Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I). (405 aa)
	ALC56_00448	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3. (107 aa)

Your Current Organism:

Trachymyrmex septentrionalis

NCBI taxonomy Id: 34720
Other names: T. septentrionalis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC56_00250	ALC56_00448	A0A151K1K6	A0A195FXN7	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3.	0.849
ALC56_00250	ALC56_00770	A0A151K1K6	A0A195FVV4	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7.	0.791
ALC56_00250	ALC56_01593	A0A151K1K6	A0A195FW37	Putative complex I intermediate-associated protein 30, mitochondrial.	Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).	0.760
ALC56_00250	ALC56_01865	A0A151K1K6	A0A195FT23	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.984
ALC56_00250	ALC56_03827	A0A151K1K6	A0A151JZ23	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6; Belongs to the complex I LYR family.	0.876
ALC56_00250	ALC56_05413	A0A151K1K6	A0A195FJ85	Putative complex I intermediate-associated protein 30, mitochondrial.	Uncharacterized protein.	0.736
ALC56_00250	ALC56_06664	A0A151K1K6	A0A151JWT4	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial.	0.854
ALC56_00250	ALC56_07999	A0A151K1K6	A0A195FB00	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3.	0.994
ALC56_00250	ALC56_08595	A0A151K1K6	A0A195F9S8	Putative complex I intermediate-associated protein 30, mitochondrial.	FAD-dependent oxidoreductase domain-containing protein 1.	0.453
ALC56_00250	ALC56_08596	A0A151K1K6	A0A195F865	Putative complex I intermediate-associated protein 30, mitochondrial.	Uncharacterized protein.	0.453
ALC56_00250	ALC56_08598	A0A151K1K6	A0A195F9B8	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9; Belongs to the complex I LYR family.	0.854
ALC56_00250	ALC56_08818	A0A151K1K6	A0A195F9Y4	Putative complex I intermediate-associated protein 30, mitochondrial.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.862
ALC56_00250	ALC56_09218	A0A151K1K6	A0A195F737	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial; Belongs to the complex I 20 kDa subunit family.	0.931
ALC56_00250	ALC56_09465	A0A151K1K6	A0A151JUE8	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10.	0.886
ALC56_00250	ALC56_10708	A0A151K1K6	A0A195F3L8	Putative complex I intermediate-associated protein 30, mitochondrial.	Uncharacterized protein.	0.809
ALC56_00250	ALC56_11245	A0A151K1K6	A0A195F219	Putative complex I intermediate-associated protein 30, mitochondrial.	Iron-sulfur protein NUBPL.	0.493
ALC56_00250	ALC56_11299	A0A151K1K6	A0A195F152	Putative complex I intermediate-associated protein 30, mitochondrial.	Uncharacterized protein.	0.836
ALC56_00250	ALC56_11300	A0A151K1K6	A0A195F279	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.993
ALC56_00250	ALC56_11475	A0A151K1K6	A0A195F1M5	Putative complex I intermediate-associated protein 30, mitochondrial.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2.	0.813
ALC56_00250	ALC56_11943	A0A151K1K6	A0A195F002	Putative complex I intermediate-associated protein 30, mitochondrial.	Uncharacterized protein.	0.961