19 items (Trachymyrmex septentrionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC56_14919	YEATS domain-containing protein 4. (227 aa)
	ALC56_05520	Mortality factor 4-like protein 1. (334 aa)
	ALC56_04648	Protein ENL. (736 aa)
	ALC56_10208	Actin-like protein 6A; Belongs to the actin family. (440 aa)
	ALC56_08890	Male-specific lethal 3 like protein. (515 aa)
	ALC56_07797	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. (456 aa)
	ALC56_04867	Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family. (3759 aa)
	ALC56_05065	Chromatin modification-related protein MEAF6. (217 aa)
	ALC56_01545	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. (461 aa)
	ALC56_01758	YEATS domain-containing protein 2. (1081 aa)
	ALC56_02748	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (453 aa)
	ALC56_03556	MRG-binding protein. (245 aa)
	ALC56_04499	Helicase domino. (2851 aa)
	ALC56_12541	Bromodomain-containing protein 8. (784 aa)
	ALC56_12178	Enhancer of polycomb-like protein. (898 aa)
	ALC56_11187	Actin-like protein 6A; Belongs to the actin family. (421 aa)
	ALC56_10333	DNA methyltransferase 1-associated protein 1. (431 aa)
	ALC56_09636	Inhibitor of growth protein 3. (385 aa)
	ALC56_14175	Vacuolar protein sorting-associated protein 72 like protein. (398 aa)

Your Current Organism:

Trachymyrmex septentrionalis

NCBI taxonomy Id: 34720
Other names: T. septentrionalis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC56_01545	ALC56_01758	A0A195FUP0	A0A195FSS5	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	YEATS domain-containing protein 2.	0.871
ALC56_01545	ALC56_02748	A0A195FUP0	A0A195FSR3	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.856
ALC56_01545	ALC56_03556	A0A195FUP0	A0A195FND8	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	MRG-binding protein.	0.977
ALC56_01545	ALC56_04499	A0A195FUP0	A0A195FM70	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Helicase domino.	0.954
ALC56_01545	ALC56_04648	A0A195FUP0	A0A151JY66	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Protein ENL.	0.871
ALC56_01545	ALC56_04867	A0A195FUP0	A0A195FJH7	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.	0.987
ALC56_01545	ALC56_05065	A0A195FUP0	A0A195FL88	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Chromatin modification-related protein MEAF6.	0.870
ALC56_01545	ALC56_05520	A0A195FUP0	A0A151JXX1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Mortality factor 4-like protein 1.	0.977
ALC56_01545	ALC56_07797	A0A195FUP0	A0A195FAZ1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	0.999
ALC56_01545	ALC56_08890	A0A195FUP0	A0A195FAN1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Male-specific lethal 3 like protein.	0.905
ALC56_01545	ALC56_09636	A0A195FUP0	A0A195F5H2	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Inhibitor of growth protein 3.	0.966
ALC56_01545	ALC56_10208	A0A195FUP0	A0A195F5B4	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Actin-like protein 6A; Belongs to the actin family.	0.985
ALC56_01545	ALC56_10333	A0A195FUP0	A0A195F505	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	DNA methyltransferase 1-associated protein 1.	0.992
ALC56_01545	ALC56_11187	A0A195FUP0	A0A195F2L1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Actin-like protein 6A; Belongs to the actin family.	0.985
ALC56_01545	ALC56_12178	A0A195FUP0	A0A195EZB0	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Enhancer of polycomb-like protein.	0.959
ALC56_01545	ALC56_12541	A0A195FUP0	A0A195EYB1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Bromodomain-containing protein 8.	0.957
ALC56_01545	ALC56_14175	A0A195FUP0	A0A195ETT9	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	Vacuolar protein sorting-associated protein 72 like protein.	0.988
ALC56_01545	ALC56_14919	A0A195FUP0	A0A195ET69	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	YEATS domain-containing protein 4.	0.986
ALC56_01758	ALC56_01545	A0A195FSS5	A0A195FUP0	YEATS domain-containing protein 2.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	0.871
ALC56_01758	ALC56_02748	A0A195FSS5	A0A195FSR3	YEATS domain-containing protein 2.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.739