8 items (Trachymyrmex septentrionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC56_14272	Sortilin-related receptor. (2183 aa)
	ALC56_10676	Low-density lipoprotein receptor-related protein 6. (1634 aa)
	ALC56_08767	Very low-density lipoprotein receptor. (1105 aa)
	ALC56_12574	Nidogen-1. (1463 aa)
	ALC56_08827	Protein cueball. (617 aa)
	ALC56_01423	Low-density lipoprotein receptor-related protein 2. (4512 aa)
	ALC56_13739	Vitellogenin receptor. (1645 aa)
	ALC56_13857	Tyrosine-protein kinase receptor. (2586 aa)

Your Current Organism:

Trachymyrmex septentrionalis

NCBI taxonomy Id: 34720
Other names: T. septentrionalis

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC56_01423	ALC56_10676	A0A195FUZ3	A0A151JTX8	Low-density lipoprotein receptor-related protein 2.	Low-density lipoprotein receptor-related protein 6.	0.688
ALC56_01423	ALC56_13739	A0A195FUZ3	A0A195EV07	Low-density lipoprotein receptor-related protein 2.	Vitellogenin receptor.	0.546
ALC56_08767	ALC56_10676	A0A195F9C0	A0A151JTX8	Very low-density lipoprotein receptor.	Low-density lipoprotein receptor-related protein 6.	0.505
ALC56_08767	ALC56_13739	A0A195F9C0	A0A195EV07	Very low-density lipoprotein receptor.	Vitellogenin receptor.	0.513
ALC56_10676	ALC56_01423	A0A151JTX8	A0A195FUZ3	Low-density lipoprotein receptor-related protein 6.	Low-density lipoprotein receptor-related protein 2.	0.688
ALC56_10676	ALC56_08767	A0A151JTX8	A0A195F9C0	Low-density lipoprotein receptor-related protein 6.	Very low-density lipoprotein receptor.	0.505
ALC56_10676	ALC56_13739	A0A151JTX8	A0A195EV07	Low-density lipoprotein receptor-related protein 6.	Vitellogenin receptor.	0.679
ALC56_13739	ALC56_01423	A0A195EV07	A0A195FUZ3	Vitellogenin receptor.	Low-density lipoprotein receptor-related protein 2.	0.546
ALC56_13739	ALC56_08767	A0A195EV07	A0A195F9C0	Vitellogenin receptor.	Very low-density lipoprotein receptor.	0.513
ALC56_13739	ALC56_10676	A0A195EV07	A0A151JTX8	Vitellogenin receptor.	Low-density lipoprotein receptor-related protein 6.	0.679