STRINGSTRING
ALC56_02535 ALC56_02535 ALC56_02481 ALC56_02481 ALC56_13841 ALC56_13841 e(y)2 e(y)2 ALC56_11771 ALC56_11771 ALC56_07797 ALC56_07797 Sgf11 Sgf11 ALC56_02371 ALC56_02371 ALC56_02287 ALC56_02287 ALC56_01412 ALC56_01412 ALC56_01545 ALC56_01545 ALC56_00748 ALC56_00748 ALC56_02471 ALC56_02471
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC56_02535Inhibitor of growth protein. (247 aa)
ALC56_02481Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (864 aa)
ALC56_13841Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1028 aa)
e(y)2Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (260 aa)
ALC56_11771E3 ubiquitin protein ligase. (958 aa)
ALC56_07797RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. (456 aa)
Sgf11SAGA-associated factor 11 homolog; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. (344 aa)
ALC56_02371Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (467 aa)
ALC56_02287Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (497 aa)
ALC56_01412Inhibitor of growth protein. (306 aa)
ALC56_01545RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. (461 aa)
ALC56_00748Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (433 aa)
ALC56_02471Histone-lysine N-methyltransferase, H3 lysine-79 specific. (1331 aa)
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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