10 items (Trachymyrmex septentrionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC56_03076	Ataxin-3. (487 aa)
	ALC56_01898	Ubiquitin-60S ribosomal protein L40. (128 aa)
	ALC56_01976	KxDL domain-containing protein. (212 aa)
	ALC56_11818	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	ALC56_09977	Polyubiquitin-A. (686 aa)
	ALC56_13257	Polyubiquitin-A. (459 aa)
	ALC56_00306	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins. (474 aa)
	ALC56_10170	Gamma-glutamylcyclotransferase. (170 aa)
	ALC56_05069	Josephin-like protein. (233 aa)
	ALC56_04888	Spermatogenesis-associated protein 5. (799 aa)

Your Current Organism:

Trachymyrmex septentrionalis

NCBI taxonomy Id: 34720
Other names: T. septentrionalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC56_00306	ALC56_01898	A0A151K187	A0A195FT85	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.	Ubiquitin-60S ribosomal protein L40.	0.990
ALC56_00306	ALC56_03076	A0A151K187	A0A195FPL3	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.	Ataxin-3.	0.968
ALC56_00306	ALC56_04888	A0A151K187	A0A195FKQ6	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.	Spermatogenesis-associated protein 5.	0.650
ALC56_00306	ALC56_09977	A0A151K187	A0A151JU99	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.	Polyubiquitin-A.	0.987
ALC56_00306	ALC56_10170	A0A151K187	A0A195F4U9	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.	Gamma-glutamylcyclotransferase.	0.973
ALC56_00306	ALC56_11818	A0A151K187	A0A151JTF5	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.	Ubiquitin-40S ribosomal protein S27a.	0.988
ALC56_00306	ALC56_13257	A0A151K187	A0A195EVV9	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.	Polyubiquitin-A.	0.974
ALC56_01898	ALC56_00306	A0A195FT85	A0A151K187	Ubiquitin-60S ribosomal protein L40.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.	0.990
ALC56_01898	ALC56_03076	A0A195FT85	A0A195FPL3	Ubiquitin-60S ribosomal protein L40.	Ataxin-3.	0.943
ALC56_01898	ALC56_04888	A0A195FT85	A0A195FKQ6	Ubiquitin-60S ribosomal protein L40.	Spermatogenesis-associated protein 5.	0.923
ALC56_01898	ALC56_05069	A0A195FT85	A0A195FIC0	Ubiquitin-60S ribosomal protein L40.	Josephin-like protein.	0.945
ALC56_01898	ALC56_09977	A0A195FT85	A0A151JU99	Ubiquitin-60S ribosomal protein L40.	Polyubiquitin-A.	0.993
ALC56_01898	ALC56_10170	A0A195FT85	A0A195F4U9	Ubiquitin-60S ribosomal protein L40.	Gamma-glutamylcyclotransferase.	0.997
ALC56_01898	ALC56_11818	A0A195FT85	A0A151JTF5	Ubiquitin-60S ribosomal protein L40.	Ubiquitin-40S ribosomal protein S27a.	0.999
ALC56_01898	ALC56_13257	A0A195FT85	A0A195EVV9	Ubiquitin-60S ribosomal protein L40.	Polyubiquitin-A.	0.986
ALC56_01976	ALC56_09977	A0A195FV17	A0A151JU99	KxDL domain-containing protein.	Polyubiquitin-A.	0.728
ALC56_01976	ALC56_10170	A0A195FV17	A0A195F4U9	KxDL domain-containing protein.	Gamma-glutamylcyclotransferase.	0.854
ALC56_01976	ALC56_11818	A0A195FV17	A0A151JTF5	KxDL domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.923
ALC56_01976	ALC56_13257	A0A195FV17	A0A195EVV9	KxDL domain-containing protein.	Polyubiquitin-A.	0.728
ALC56_03076	ALC56_00306	A0A195FPL3	A0A151K187	Ataxin-3.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins.	0.968