24 items (Trachymyrmex septentrionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	ALC56_11818	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	ALC56_09977	Polyubiquitin-A. (686 aa)
	ALC56_08209	Ubiquitin thioesterase OTU1. (311 aa)
	ALC56_04673	Adenomatous polyposis coli protein. (2840 aa)
	ALC56_04087	OTU domain-containing protein 7B. (556 aa)
	ALC56_15233	Ubiquitin thioesterase otubain-like protein. (264 aa)
	ALC56_14705	Ras-like GTP-binding protein Rho1. (187 aa)
	ALC56_13543	Adenomatous polyposis coli protein. (1040 aa)
	ALC56_13257	Polyubiquitin-A. (459 aa)
	ALC56_13336	E3 ubiquitin-protein ligase RNF13. (446 aa)
	ALC56_12558	Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family. (269 aa)
	ALC56_12298	Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family. (819 aa)
	ALC56_11082	Ubiquitin thioesterase trabid. (738 aa)
	ALC56_10170	Gamma-glutamylcyclotransferase. (170 aa)
	ALC56_10402	OTU domain-containing protein 5-A. (587 aa)
	ALC56_09617	Steroid hormone receptor ERR1. (457 aa)
	ALC56_07917	Mitogen-activated protein kinase kinase kinase 9. (1126 aa)
	ALC56_05219	TNF receptor-associated factor 6. (405 aa)
	ALC56_04888	Spermatogenesis-associated protein 5. (799 aa)
	ALC56_03532	annotation not available (600 aa)
	ALC56_01898	Ubiquitin-60S ribosomal protein L40. (128 aa)
	ALC56_00596	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (649 aa)
	ALC56_01976	KxDL domain-containing protein. (212 aa)
	ALC56_05696	Tumor protein 63. (305 aa)

Your Current Organism:

Trachymyrmex septentrionalis

NCBI taxonomy Id: 34720
Other names: T. septentrionalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC56_00596	ALC56_03532	A0A195FYN7	A0A195FPW0	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	annotation not available	0.738
ALC56_00596	ALC56_09977	A0A195FYN7	A0A151JU99	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Polyubiquitin-A.	0.745
ALC56_00596	ALC56_10170	A0A195FYN7	A0A195F4U9	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Gamma-glutamylcyclotransferase.	0.774
ALC56_00596	ALC56_11818	A0A195FYN7	A0A151JTF5	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Ubiquitin-40S ribosomal protein S27a.	0.774
ALC56_00596	ALC56_13257	A0A195FYN7	A0A195EVV9	Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Polyubiquitin-A.	0.745
ALC56_01898	ALC56_03532	A0A195FT85	A0A195FPW0	Ubiquitin-60S ribosomal protein L40.	annotation not available	0.749
ALC56_01898	ALC56_04087	A0A195FT85	A0A151JYJ9	Ubiquitin-60S ribosomal protein L40.	OTU domain-containing protein 7B.	0.942
ALC56_01898	ALC56_04888	A0A195FT85	A0A195FKQ6	Ubiquitin-60S ribosomal protein L40.	Spermatogenesis-associated protein 5.	0.923
ALC56_01898	ALC56_05219	A0A195FT85	A0A195FJU3	Ubiquitin-60S ribosomal protein L40.	TNF receptor-associated factor 6.	0.974
ALC56_01898	ALC56_07917	A0A195FT85	A0A195FBC2	Ubiquitin-60S ribosomal protein L40.	Mitogen-activated protein kinase kinase kinase 9.	0.785
ALC56_01898	ALC56_08209	A0A195FT85	A0A151JVU8	Ubiquitin-60S ribosomal protein L40.	Ubiquitin thioesterase OTU1.	0.925
ALC56_01898	ALC56_09977	A0A195FT85	A0A151JU99	Ubiquitin-60S ribosomal protein L40.	Polyubiquitin-A.	0.993
ALC56_01898	ALC56_10170	A0A195FT85	A0A195F4U9	Ubiquitin-60S ribosomal protein L40.	Gamma-glutamylcyclotransferase.	0.997
ALC56_01898	ALC56_10402	A0A195FT85	A0A195F4Y0	Ubiquitin-60S ribosomal protein L40.	OTU domain-containing protein 5-A.	0.968
ALC56_01898	ALC56_11082	A0A195FT85	A0A195F3D3	Ubiquitin-60S ribosomal protein L40.	Ubiquitin thioesterase trabid.	0.964
ALC56_01898	ALC56_11818	A0A195FT85	A0A151JTF5	Ubiquitin-60S ribosomal protein L40.	Ubiquitin-40S ribosomal protein S27a.	0.999
ALC56_01898	ALC56_12298	A0A195FT85	A0A195EZP1	Ubiquitin-60S ribosomal protein L40.	Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	0.923
ALC56_01898	ALC56_12558	A0A195FT85	A0A195EYU8	Ubiquitin-60S ribosomal protein L40.	Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family.	0.987
ALC56_01898	ALC56_13257	A0A195FT85	A0A195EVV9	Ubiquitin-60S ribosomal protein L40.	Polyubiquitin-A.	0.986
ALC56_01898	ALC56_13336	A0A195FT85	A0A195EW65	Ubiquitin-60S ribosomal protein L40.	E3 ubiquitin-protein ligase RNF13.	0.808