STRINGSTRING
ALC56_07700 ALC56_07700 ALC56_00337 ALC56_00337 ALC56_00959 ALC56_00959 ALC56_01976 ALC56_01976 ALC56_01461 ALC56_01461 ALC56_02044 ALC56_02044 ALC56_01847 ALC56_01847 ALC56_01844 ALC56_01844 ALC56_01812 ALC56_01812 ALC56_02748 ALC56_02748 ALC56_02286 ALC56_02286 ALC56_02777 ALC56_02777 ALC56_02950 ALC56_02950 ALC56_03592 ALC56_03592 ALC56_04420 ALC56_04420 ALC56_04503 ALC56_04503 ALC56_04498 ALC56_04498 ALC56_04353 ALC56_04353 ALC56_04537 ALC56_04537 ALC56_05313 ALC56_05313 ALC56_05696 ALC56_05696 ALC56_06167 ALC56_06167 ALC56_06081 ALC56_06081 ALC56_06105 ALC56_06105 ALC56_06031 ALC56_06031 ALC56_06598 ALC56_06598 ALC56_06548 ALC56_06548 ALC56_06502 ALC56_06502 ALC56_06856 ALC56_06856 ALC56_06591 ALC56_06591 ALC56_06807 ALC56_06807 ALC56_07621 ALC56_07621 Fen1 Fen1 ALC56_08769 ALC56_08769 ALC56_08836 ALC56_08836 ALC56_08437 ALC56_08437 ALC56_09207 ALC56_09207 ALC56_09739 ALC56_09739 ALC56_09734 ALC56_09734 ALC56_09786 ALC56_09786 ALC56_10279 ALC56_10279 ALC56_10099 ALC56_10099 ALC56_10234 ALC56_10234 ALC56_10229 ALC56_10229 ALC56_10098 ALC56_10098 ALC56_10397 ALC56_10397 ALC56_10170 ALC56_10170 ALC56_10231 ALC56_10231 ALC56_10233 ALC56_10233 ALC56_10280 ALC56_10280 ALC56_10230 ALC56_10230 ALC56_11463 ALC56_11463 ALC56_11423 ALC56_11423 ALC56_11561 ALC56_11561 ALC56_11898 ALC56_11898 ALC56_12501 ALC56_12501 ALC56_13387 ALC56_13387 ALC56_13359 ALC56_13359 ALC56_13330 ALC56_13330 ALC56_13343 ALC56_13343 ALC56_13257 ALC56_13257 ALC56_14076 ALC56_14076 ALC56_14518 ALC56_14518 ALC56_09191 ALC56_09191 ALC56_14902 ALC56_14902 ALC56_14782 ALC56_14782 ALC56_14742 ALC56_14742 ALC56_15266 ALC56_15266 ALC56_00049 ALC56_00049 ALC56_00925 ALC56_00925 ALC56_00921 ALC56_00921 ALC56_03967 ALC56_03967 ALC56_04167 ALC56_04167 ALC56_05521 ALC56_05521 ALC56_06992 ALC56_06992 ALC56_07005 ALC56_07005 ALC56_07203 ALC56_07203 ALC56_07561 ALC56_07561 ALC56_07714 ALC56_07714 ALC56_07734 ALC56_07734 ALC56_08203 ALC56_08203 ALC56_08160 ALC56_08160 ALC56_09977 ALC56_09977 ALC56_11685 ALC56_11685 ALC56_12908 ALC56_12908 ALC56_11654 ALC56_11654 ALC56_14045 ALC56_14045 ALC56_13791 ALC56_13791 ALC56_13794 ALC56_13794 ALC56_14974 ALC56_14974
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC56_07700RCC1 and BTB domain-containing protein 1. (947 aa)
ALC56_00337DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. (1402 aa)
ALC56_00959Importin subunit alpha-2. (477 aa)
ALC56_01976KxDL domain-containing protein. (212 aa)
ALC56_01461RecQ-mediated genome instability protein 1. (595 aa)
ALC56_02044Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (691 aa)
ALC56_01847BRCA1-A complex subunit BRE. (380 aa)
ALC56_01844Crossover junction endonuclease MUS81. (434 aa)
ALC56_01812DNA repair protein RAD50. (1499 aa)
ALC56_02748Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (453 aa)
ALC56_02286Serine/threonine-protein kinase grp. (428 aa)
ALC56_02777Poly [ADP-ribose] polymerase. (981 aa)
ALC56_02950Cell cycle checkpoint control protein; Belongs to the rad9 family. (478 aa)
ALC56_03592Helicase POLQ-like protein. (2007 aa)
ALC56_04420DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (3813 aa)
ALC56_04503DNA topoisomerase 2-binding protein 1-A. (1276 aa)
ALC56_04498DNA repair protein RAD51 like protein 4. (321 aa)
ALC56_04353Cyclin-A2; Belongs to the cyclin family. (481 aa)
ALC56_04537Small ubiquitin-related modifier. (126 aa)
ALC56_05313Uncharacterized protein. (380 aa)
ALC56_05696Tumor protein 63. (305 aa)
ALC56_06167Ankyrin repeat domain-containing protein 12. (756 aa)
ALC56_06081X-ray repair cross-complementing protein 5. (780 aa)
ALC56_06105Crossover junction endonuclease EME1. (454 aa)
ALC56_06031Exonuclease 3'-5' domain-containing protein 2. (607 aa)
ALC56_06598DNA repair protein XRCC1. (488 aa)
ALC56_06548BRCA1-A complex subunit MERIT40. (316 aa)
ALC56_06502Serine/threonine-protein kinase Chk2. (470 aa)
ALC56_06856DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. (340 aa)
ALC56_06591DNA endonuclease RBBP8. (532 aa)
ALC56_06807Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (596 aa)
ALC56_07621Tudor domain-containing protein 3. (694 aa)
Fen1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (381 aa)
ALC56_08769DNA repair protein RAD52 like protein. (270 aa)
ALC56_08836Breast cancer type 1 susceptibility protein like protein. (1846 aa)
ALC56_08437Asparaginyl-tRNA synthetase, cytoplasmic. (1830 aa)
ALC56_09207Uncharacterized protein C2orf24 like protein. (416 aa)
ALC56_09739Protein timeless like protein. (657 aa)
ALC56_09734Protein timeless like protein. (925 aa)
ALC56_09786DNA polymerase delta subunit 3. (400 aa)
ALC56_10279Importin subunit alpha. (915 aa)
ALC56_10099DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1033 aa)
ALC56_10234Putative tyrosyl-DNA phosphodiesterase. (470 aa)
ALC56_10229Putative tyrosyl-DNA phosphodiesterase. (630 aa)
ALC56_10098DNA topoisomerase 3-alpha. (131 aa)
ALC56_10397Serine/threonine-protein phosphatase 4 regulatory subunit 2. (667 aa)
ALC56_10170Gamma-glutamylcyclotransferase. (170 aa)
ALC56_10231Putative tyrosyl-DNA phosphodiesterase. (394 aa)
ALC56_10233Putative tyrosyl-DNA phosphodiesterase. (553 aa)
ALC56_10280Importin subunit alpha-1. (743 aa)
ALC56_10230Putative tyrosyl-DNA phosphodiesterase. (441 aa)
ALC56_11463DNA repair protein XRCC3. (252 aa)
ALC56_11423E3 ubiquitin-protein ligase RNF8-B. (297 aa)
ALC56_11561ATP-dependent DNA helicase Q4. (1497 aa)
ALC56_11898Lys-63-specific deubiquitinase BRCC36. (249 aa)
ALC56_12501Flap endonuclease GEN. (737 aa)
ALC56_13387Tyrosine-protein kinase. (1390 aa)
ALC56_13359Breast cancer type 2 susceptibility protein like protein. (1738 aa)
ALC56_13330RING-type domain-containing protein. (845 aa)
ALC56_13343RCC1 and BTB domain-containing protein 1. (346 aa)
ALC56_13257Polyubiquitin-A. (459 aa)
ALC56_14076Chromatin-remodeling complex ATPase chain Iswi. (1007 aa)
ALC56_14518X-linked retinitis pigmentosa GTPase regulator like protein. (1751 aa)
ALC56_09191Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
ALC56_14902Uncharacterized protein C16orf73 like protein. (473 aa)
ALC56_14782Uncharacterized protein. (444 aa)
ALC56_14742TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (324 aa)
ALC56_15266NAD-dependent deacetylase sirtuin-6. (405 aa)
ALC56_00049RCC1 and BTB domain-containing protein 1. (124 aa)
ALC56_00925RCC1 and BTB domain-containing protein 1. (66 aa)
ALC56_00921Uncharacterized protein. (109 aa)
ALC56_03967NAD-dependent deacetylase sirtuin-7. (523 aa)
ALC56_04167RCC1 and BTB domain-containing protein 1. (458 aa)
ALC56_05521Protein artemis. (373 aa)
ALC56_06992RCC1 and BTB domain-containing protein 1. (332 aa)
ALC56_07005RCC1 and BTB domain-containing protein 1. (553 aa)
ALC56_07203Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (527 aa)
ALC56_07561Uncharacterized protein. (300 aa)
ALC56_07714RCC1 and BTB domain-containing protein 1. (280 aa)
ALC56_07734Cell division protein kinase 2; Belongs to the protein kinase superfamily. (312 aa)
ALC56_08203Serine-protein kinase ATM; Belongs to the PI3/PI4-kinase family. (1760 aa)
ALC56_08160DNA repair protein XRCC2. (267 aa)
ALC56_09977Polyubiquitin-A. (686 aa)
ALC56_11685Structure-specific endonuclease subunit slx1. (272 aa)
ALC56_12908RCC1 and BTB domain-containing protein 1. (390 aa)
ALC56_11654Tumor suppressor p53-binding protein 1. (1415 aa)
ALC56_14045Cell cycle checkpoint protein RAD17. (366 aa)
ALC56_13791DNA ligase. (1001 aa)
ALC56_13794BTB domain-containing protein. (149 aa)
ALC56_14974Serine/threonine-protein phosphatase. (241 aa)
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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