STRINGSTRING
ALC56_06245 ALC56_06245 ALC56_06992 ALC56_06992 ALC56_07005 ALC56_07005 ALC56_07462 ALC56_07462 ALC56_07700 ALC56_07700 ALC56_09118 ALC56_09118 ALC56_09977 ALC56_09977 ALC56_11662 ALC56_11662 ALC56_10664 ALC56_10664 ALC56_11642 ALC56_11642 ALC56_12908 ALC56_12908 ALC56_11818 ALC56_11818 ALC56_11808 ALC56_11808 ALC56_13794 ALC56_13794 ALC56_07714 ALC56_07714 ALC56_00584 ALC56_00584 ALC56_00582 ALC56_00582 ALC56_00580 ALC56_00580 ALC56_01255 ALC56_01255 ALC56_01578 ALC56_01578 ALC56_01976 ALC56_01976 ALC56_01718 ALC56_01718 ALC56_01898 ALC56_01898 ALC56_01853 ALC56_01853 ALC56_02787 ALC56_02787 ALC56_02939 ALC56_02939 ALC56_02777 ALC56_02777 ALC56_02609 ALC56_02609 ALC56_03462 ALC56_03462 ALC56_02688 ALC56_02688 ALC56_03585 ALC56_03585 ALC56_04499 ALC56_04499 ALC56_04790 ALC56_04790 ALC56_04537 ALC56_04537 ALC56_06430 ALC56_06430 ALC56_06246 ALC56_06246 ALC56_06807 ALC56_06807 ALC56_06770 ALC56_06770 ALC56_07856 ALC56_07856 ALC56_07797 ALC56_07797 ALC56_07914 ALC56_07914 ALC56_08897 ALC56_08897 ALC56_08887 ALC56_08887 ALC56_09292 ALC56_09292 ALC56_09350 ALC56_09350 ALC56_09786 ALC56_09786 ALC56_09634 ALC56_09634 ALC56_10524 ALC56_10524 ALC56_10509 ALC56_10509 ALC56_10208 ALC56_10208 ALC56_10163 ALC56_10163 ALC56_10170 ALC56_10170 ALC56_10523 ALC56_10523 ALC56_10722 ALC56_10722 ALC56_11218 ALC56_11218 ALC56_10981 ALC56_10981 ALC56_11030 ALC56_11030 ALC56_11187 ALC56_11187 ALC56_10728 ALC56_10728 ALC56_12793 ALC56_12793 ALC56_12640 ALC56_12640 ALC56_12858 ALC56_12858 ALC56_13102 ALC56_13102 ALC56_13339 ALC56_13339 ALC56_13343 ALC56_13343 ALC56_13257 ALC56_13257 ALC56_13630 ALC56_13630 ALC56_13599 ALC56_13599 ALC56_13608 ALC56_13608 ALC56_13553 ALC56_13553 ALC56_14886 ALC56_14886 ALC56_14142 ALC56_14142 ALC56_14784 ALC56_14784 ALC56_14774 ALC56_14774 ALC56_14518 ALC56_14518 ALC56_14933 ALC56_14933 ALC56_14615 ALC56_14615 ALC56_14902 ALC56_14902 ALC56_14782 ALC56_14782 ALC56_15258 ALC56_15258 ALC56_15113 ALC56_15113 ALC56_15256 ALC56_15256 ALC56_00049 ALC56_00049 ALC56_00925 ALC56_00925 ALC56_00314 ALC56_00314 ALC56_00319 ALC56_00319 ALC56_02495 ALC56_02495 ALC56_01199 ALC56_01199 ALC56_01353 ALC56_01353 ALC56_02531 ALC56_02531 ALC56_03973 ALC56_03973 ALC56_04167 ALC56_04167 ALC56_04638 ALC56_04638
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC56_06245Uncharacterized protein. (163 aa)
ALC56_06992RCC1 and BTB domain-containing protein 1. (332 aa)
ALC56_07005RCC1 and BTB domain-containing protein 1. (553 aa)
ALC56_07462Nuclear factor. (1359 aa)
ALC56_07700RCC1 and BTB domain-containing protein 1. (947 aa)
ALC56_09118General transcription factor IIH subunit 1. (559 aa)
ALC56_09977Polyubiquitin-A. (686 aa)
ALC56_11662Cell division protein kinase 7; Belongs to the protein kinase superfamily. (338 aa)
ALC56_10664Uncharacterized protein. (144 aa)
ALC56_11642Uncharacterized protein. (510 aa)
ALC56_12908RCC1 and BTB domain-containing protein 1. (390 aa)
ALC56_11818Ubiquitin-40S ribosomal protein S27a. (156 aa)
ALC56_11808Uncharacterized protein. (213 aa)
ALC56_13794BTB domain-containing protein. (149 aa)
ALC56_07714RCC1 and BTB domain-containing protein 1. (280 aa)
ALC56_00584Actin, muscle. (376 aa)
ALC56_00582Actin-5, muscle-specific. (376 aa)
ALC56_00580Replication factor C subunit 1. (1034 aa)
ALC56_01255Replication factor C subunit 4. (370 aa)
ALC56_01578Putative DNA helicase Ino80. (1619 aa)
ALC56_01976KxDL domain-containing protein. (212 aa)
ALC56_01718COP9 signalosome complex subunit 7. (325 aa)
ALC56_01898Ubiquitin-60S ribosomal protein L40. (128 aa)
ALC56_01853DNA polymerase epsilon subunit 3. (131 aa)
ALC56_02787DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2243 aa)
ALC56_02939INO80 complex subunit B. (311 aa)
ALC56_02777Poly [ADP-ribose] polymerase. (981 aa)
ALC56_02609Actin-related protein 5; Belongs to the actin family. (675 aa)
ALC56_03462UV excision repair protein RAD23 like protein B. (360 aa)
ALC56_02688Uncharacterized protein. (234 aa)
ALC56_03585Cullin-4B; Belongs to the cullin family. (849 aa)
ALC56_04499Helicase domino. (2851 aa)
ALC56_04790DNA excision repair protein haywire. (741 aa)
ALC56_04537Small ubiquitin-related modifier. (126 aa)
ALC56_06430DNA excision repair protein ERCC-1. (262 aa)
ALC56_06246DNA repair endonuclease XPF. (924 aa)
ALC56_06807Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (596 aa)
ALC56_06770Small ubiquitin-related modifier. (87 aa)
ALC56_07856Transcriptional repressor protein YY1. (399 aa)
ALC56_07797RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. (456 aa)
ALC56_07914Microspherule protein 1. (471 aa)
ALC56_08897INO80 complex subunit D. (513 aa)
ALC56_08887Replication factor C subunit 2. (354 aa)
ALC56_09292Cyclin-H; Belongs to the cyclin family. (331 aa)
ALC56_09350COP9 signalosome complex subunit 8. (208 aa)
ALC56_09786DNA polymerase delta subunit 3. (400 aa)
ALC56_09634General transcription factor IIH subunit 3. (314 aa)
ALC56_10524Uncharacterized protein. (492 aa)
ALC56_10509INO80 complex subunit E. (258 aa)
ALC56_10208Actin-like protein 6A; Belongs to the actin family. (440 aa)
ALC56_10163Replication factor C subunit 3. (354 aa)
ALC56_10170Gamma-glutamylcyclotransferase. (170 aa)
ALC56_10523Uncharacterized protein. (504 aa)
ALC56_10722INO80 complex subunit C. (196 aa)
ALC56_11218RING-box protein 1A. (200 aa)
ALC56_10981RNA polymerase II-associated protein 3. (497 aa)
ALC56_11030COP9 signalosome complex subunit 4. (407 aa)
ALC56_11187Actin-like protein 6A; Belongs to the actin family. (421 aa)
ALC56_10728DNA polymerase epsilon subunit 4. (122 aa)
ALC56_12793Uncharacterized protein. (170 aa)
ALC56_12640DNA damage-binding protein 1. (1138 aa)
ALC56_12858Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (544 aa)
ALC56_13102Uncharacterized protein. (1124 aa)
ALC56_13339COP9 signalosome complex subunit 6. (334 aa)
ALC56_13343RCC1 and BTB domain-containing protein 1. (346 aa)
ALC56_13257Polyubiquitin-A. (459 aa)
ALC56_13630Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (275 aa)
ALC56_13599DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (490 aa)
ALC56_13608COP9 signalosome complex subunit 3. (445 aa)
ALC56_13553COP9 signalosome complex subunit 1. (657 aa)
ALC56_14886DNA repair protein complementing XP-A cells like protein. (262 aa)
ALC56_14142DNA repair protein complementing XP-C cells like protein. (956 aa)
ALC56_14784SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family. (159 aa)
ALC56_14774Replication factor C subunit 5. (465 aa)
ALC56_14518X-linked retinitis pigmentosa GTPase regulator like protein. (1751 aa)
ALC56_14933General transcription factor IIH subunit 2. (433 aa)
ALC56_14615Uncharacterized protein. (115 aa)
ALC56_14902Uncharacterized protein C16orf73 like protein. (473 aa)
ALC56_14782Uncharacterized protein. (444 aa)
ALC56_15258Uncharacterized protein. (259 aa)
ALC56_15113General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
ALC56_15256Replication protein A 32 kDa subunit. (241 aa)
ALC56_00049RCC1 and BTB domain-containing protein 1. (124 aa)
ALC56_00925RCC1 and BTB domain-containing protein 1. (66 aa)
ALC56_00314Actin-5C. (376 aa)
ALC56_00319Non-histone protein 10. (208 aa)
ALC56_02495Uncharacterized protein. (62 aa)
ALC56_01199TFIIH basal transcription factor complex helicase XPD subunit. (774 aa)
ALC56_01353Replication factor C subunit 1. (1148 aa)
ALC56_02531Ubiquitin-like domain-containing protein. (246 aa)
ALC56_03973COP9 signalosome complex subunit 5. (345 aa)
ALC56_04167RCC1 and BTB domain-containing protein 1. (458 aa)
ALC56_04638CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (320 aa)
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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