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ALC56_08887 ALC56_08887 ALC56_08743 ALC56_08743 ALC56_07667 ALC56_07667 ALC56_13791 ALC56_13791 ALC56_06775 ALC56_06775 ALC56_06807 ALC56_06807 ALC56_06434 ALC56_06434 ALC56_06246 ALC56_06246 ALC56_06598 ALC56_06598 ALC56_06430 ALC56_06430 ALC56_05356 ALC56_05356 ALC56_05447 ALC56_05447 ALC56_11818 ALC56_11818 ALC56_13794 ALC56_13794 ALC56_14049 ALC56_14049 ALC56_03973 ALC56_03973 ALC56_04167 ALC56_04167 ALC56_04638 ALC56_04638 ALC56_07160 ALC56_07160 ALC56_01117 ALC56_01117 ALC56_00580 ALC56_00580 ALC56_01255 ALC56_01255 ALC56_00661 ALC56_00661 ALC56_00978 ALC56_00978 ALC56_01976 ALC56_01976 ALC56_02080 ALC56_02080 ALC56_01718 ALC56_01718 ALC56_02026 ALC56_02026 ALC56_01898 ALC56_01898 ALC56_01853 ALC56_01853 ALC56_02787 ALC56_02787 ALC56_02399 ALC56_02399 ALC56_03001 ALC56_03001 ALC56_03557 ALC56_03557 ALC56_03285 ALC56_03285 ALC56_03585 ALC56_03585 ALC56_04425 ALC56_04425 ALC56_04790 ALC56_04790 ALC56_04357 ALC56_04357 ALC56_04230 ALC56_04230 ALC56_01353 ALC56_01353 ALC56_03702 ALC56_03702 ALC56_06992 ALC56_06992 ALC56_07005 ALC56_07005 ALC56_07714 ALC56_07714 ALC56_07700 ALC56_07700 ALC56_09118 ALC56_09118 ALC56_09977 ALC56_09977 ALC56_11662 ALC56_11662 ALC56_12908 ALC56_12908 ALC56_01213 ALC56_01213 ALC56_01199 ALC56_01199 ALC56_00254 ALC56_00254 ALC56_00925 ALC56_00925 ALC56_00049 ALC56_00049 ALC56_15256 ALC56_15256 ALC56_15113 ALC56_15113 ALC56_15258 ALC56_15258 ALC56_14807 ALC56_14807 ALC56_14808 ALC56_14808 ALC56_14902 ALC56_14902 ALC56_14615 ALC56_14615 ALC56_14933 ALC56_14933 ALC56_14518 ALC56_14518 ALC56_14774 ALC56_14774 ALC56_14886 ALC56_14886 ALC56_14194 ALC56_14194 ALC56_13848 ALC56_13848 ALC56_13553 ALC56_13553 ALC56_13608 ALC56_13608 ALC56_13720 ALC56_13720 ALC56_13599 ALC56_13599 ALC56_13630 ALC56_13630 ALC56_13257 ALC56_13257 ALC56_13343 ALC56_13343 ALC56_13339 ALC56_13339 ALC56_13102 ALC56_13102 ALC56_13658 ALC56_13658 ALC56_12997 ALC56_12997 ALC56_12629 ALC56_12629 ALC56_12640 ALC56_12640 ALC56_12111 ALC56_12111 ALC56_10728 ALC56_10728 ALC56_11030 ALC56_11030 ALC56_11218 ALC56_11218 ALC56_10170 ALC56_10170 ALC56_10163 ALC56_10163 ALC56_09634 ALC56_09634 ALC56_09786 ALC56_09786 ALC56_09779 ALC56_09779 ALC56_09350 ALC56_09350 ALC56_09292 ALC56_09292
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC56_08887Replication factor C subunit 2. (354 aa)
ALC56_08743Intron-binding protein aquarius. (1354 aa)
ALC56_07667CREB-binding protein. (2178 aa)
ALC56_13791DNA ligase. (1001 aa)
ALC56_06775DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1878 aa)
ALC56_06807Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (596 aa)
ALC56_06434DNA-directed RNA polymerase II subunit RPB7. (267 aa)
ALC56_06246DNA repair endonuclease XPF. (924 aa)
ALC56_06598DNA repair protein XRCC1. (488 aa)
ALC56_06430DNA excision repair protein ERCC-1. (262 aa)
ALC56_05356TNFR-Cys domain-containing protein. (337 aa)
ALC56_05447Uncharacterized protein. (299 aa)
ALC56_11818Ubiquitin-40S ribosomal protein S27a. (156 aa)
ALC56_13794BTB domain-containing protein. (149 aa)
ALC56_14049DUF2236 domain-containing protein. (442 aa)
ALC56_03973COP9 signalosome complex subunit 5. (345 aa)
ALC56_04167RCC1 and BTB domain-containing protein 1. (458 aa)
ALC56_04638CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (320 aa)
ALC56_07160DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (151 aa)
ALC56_01117DUF2236 domain-containing protein. (486 aa)
ALC56_00580Replication factor C subunit 1. (1034 aa)
ALC56_01255Replication factor C subunit 4. (370 aa)
ALC56_00661DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
ALC56_00978Pre-mRNA-processing factor 19. (502 aa)
ALC56_01976KxDL domain-containing protein. (212 aa)
ALC56_02080Pre-mRNA-splicing factor SYF1. (849 aa)
ALC56_01718COP9 signalosome complex subunit 7. (325 aa)
ALC56_02026DUF2236 domain-containing protein. (484 aa)
ALC56_01898Ubiquitin-60S ribosomal protein L40. (128 aa)
ALC56_01853DNA polymerase epsilon subunit 3. (131 aa)
ALC56_02787DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2243 aa)
ALC56_02399DNA-directed RNA polymerases I, II, and III subunit RPABC2. (130 aa)
ALC56_03001DNA-directed RNA polymerases I, II, and III subunit RPABC5. (139 aa)
ALC56_03557DNA-directed RNA polymerase II subunit RPB3. (276 aa)
ALC56_03285DNA-directed RNA polymerases I, II, and III subunit RPABC4. (74 aa)
ALC56_03585Cullin-4B; Belongs to the cullin family. (849 aa)
ALC56_04425DNA ligase. (1012 aa)
ALC56_04790DNA excision repair protein haywire. (741 aa)
ALC56_04357DNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
ALC56_04230DNA excision repair protein ERCC-6. (1026 aa)
ALC56_01353Replication factor C subunit 1. (1148 aa)
ALC56_03702DUF2236 domain-containing protein. (426 aa)
ALC56_06992RCC1 and BTB domain-containing protein 1. (332 aa)
ALC56_07005RCC1 and BTB domain-containing protein 1. (553 aa)
ALC56_07714RCC1 and BTB domain-containing protein 1. (280 aa)
ALC56_07700RCC1 and BTB domain-containing protein 1. (947 aa)
ALC56_09118General transcription factor IIH subunit 1. (559 aa)
ALC56_09977Polyubiquitin-A. (686 aa)
ALC56_11662Cell division protein kinase 7; Belongs to the protein kinase superfamily. (338 aa)
ALC56_12908RCC1 and BTB domain-containing protein 1. (390 aa)
ALC56_01213Uncharacterized protein. (977 aa)
ALC56_01199TFIIH basal transcription factor complex helicase XPD subunit. (774 aa)
ALC56_00254Pre-mRNA-splicing factor ISY1 like protein. (234 aa)
ALC56_00925RCC1 and BTB domain-containing protein 1. (66 aa)
ALC56_00049RCC1 and BTB domain-containing protein 1. (124 aa)
ALC56_15256Replication protein A 32 kDa subunit. (241 aa)
ALC56_15113General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
ALC56_15258Uncharacterized protein. (259 aa)
ALC56_14807DUF2236 domain-containing protein. (336 aa)
ALC56_14808DUF2236 domain-containing protein. (334 aa)
ALC56_14902Uncharacterized protein C16orf73 like protein. (473 aa)
ALC56_14615Uncharacterized protein. (115 aa)
ALC56_14933General transcription factor IIH subunit 2. (433 aa)
ALC56_14518X-linked retinitis pigmentosa GTPase regulator like protein. (1751 aa)
ALC56_14774Replication factor C subunit 5. (465 aa)
ALC56_14886DNA repair protein complementing XP-A cells like protein. (262 aa)
ALC56_14194Peptidyl-prolyl cis-trans isomerase E. (289 aa)
ALC56_13848Transcription elongation factor S-II. (297 aa)
ALC56_13553COP9 signalosome complex subunit 1. (657 aa)
ALC56_13608COP9 signalosome complex subunit 3. (445 aa)
ALC56_13720DUF2236 domain-containing protein. (399 aa)
ALC56_13599DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (490 aa)
ALC56_13630Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (275 aa)
ALC56_13257Polyubiquitin-A. (459 aa)
ALC56_13343RCC1 and BTB domain-containing protein 1. (346 aa)
ALC56_13339COP9 signalosome complex subunit 6. (334 aa)
ALC56_13102Uncharacterized protein. (1124 aa)
ALC56_13658Death-inducer obliterator 1. (2352 aa)
ALC56_12997DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1124 aa)
ALC56_12629DUF2236 domain-containing protein. (319 aa)
ALC56_12640DNA damage-binding protein 1. (1138 aa)
ALC56_12111Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family. (1221 aa)
ALC56_10728DNA polymerase epsilon subunit 4. (122 aa)
ALC56_11030COP9 signalosome complex subunit 4. (407 aa)
ALC56_11218RING-box protein 1A. (200 aa)
ALC56_10170Gamma-glutamylcyclotransferase. (170 aa)
ALC56_10163Replication factor C subunit 3. (354 aa)
ALC56_09634General transcription factor IIH subunit 3. (314 aa)
ALC56_09786DNA polymerase delta subunit 3. (400 aa)
ALC56_09779Leucine-rich repeat-containing protein 67. (359 aa)
ALC56_09350COP9 signalosome complex subunit 8. (208 aa)
ALC56_09292Cyclin-H; Belongs to the cyclin family. (331 aa)
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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