STRINGSTRING
ALC56_05029 ALC56_05029 ALC56_05356 ALC56_05356 ALC56_05331 ALC56_05331 ALC56_05752 ALC56_05752 ALC56_05665 ALC56_05665 ALC56_05628 ALC56_05628 ALC56_06596 ALC56_06596 ALC56_06807 ALC56_06807 ALC56_06466 ALC56_06466 ALC56_06849 ALC56_06849 ALC56_07356 ALC56_07356 ALC56_07373 ALC56_07373 ALC56_07390 ALC56_07390 ALC56_07911 ALC56_07911 ALC56_07821 ALC56_07821 ALC56_08927 ALC56_08927 ALC56_08887 ALC56_08887 Fen1 Fen1 ALC56_08812 ALC56_08812 ALC56_02782 ALC56_02782 ALC56_02787 ALC56_02787 ALC56_02076 ALC56_02076 ALC56_01853 ALC56_01853 ALC56_01898 ALC56_01898 ALC56_01975 ALC56_01975 MCM7 MCM7 ALC56_01976 ALC56_01976 ALC56_00973 ALC56_00973 ALC56_01058 ALC56_01058 ALC56_01253 ALC56_01253 ALC56_01512 ALC56_01512 ALC56_00876 ALC56_00876 ALC56_00721 ALC56_00721 ALC56_01255 ALC56_01255 ALC56_00360 ALC56_00360 ALC56_00580 ALC56_00580 ALC56_00154 ALC56_00154 ALC56_08931 ALC56_08931 ALC56_08531 ALC56_08531 ALC56_09383 ALC56_09383 ALC56_09810 ALC56_09810 ALC56_09705 ALC56_09705 ALC56_09635 ALC56_09635 ALC56_09618 ALC56_09618 ALC56_09702 ALC56_09702 ALC56_09704 ALC56_09704 ALC56_09786 ALC56_09786 ALC56_10163 ALC56_10163 ALC56_10170 ALC56_10170 ALC56_10701 ALC56_10701 ALC56_10307 ALC56_10307 ALC56_11218 ALC56_11218 ALC56_10893 ALC56_10893 ALC56_13257 ALC56_13257 ALC56_13630 ALC56_13630 ALC56_13599 ALC56_13599 ALC56_13558 ALC56_13558 ALC56_13928 ALC56_13928 ALC56_13406 ALC56_13406 ALC56_13885 ALC56_13885 ALC56_14280 ALC56_14280 ALC56_13802 ALC56_13802 ALC56_14791 ALC56_14791 ALC56_14504 ALC56_14504 ALC56_14774 ALC56_14774 ALC56_03826 ALC56_03826 ALC56_01353 ALC56_01353 ALC56_00925 ALC56_00925 ALC56_00091 ALC56_00091 ALC56_00049 ALC56_00049 ALC56_00084 ALC56_00084 ALC56_15121 ALC56_15121 ALC56_15256 ALC56_15256 ALC56_15279 ALC56_15279 ALC56_15110 ALC56_15110 ALC56_14639 ALC56_14639 ALC56_15258 ALC56_15258 ALC56_14837 ALC56_14837 ALC56_14902 ALC56_14902 ALC56_06386 ALC56_06386 ALC56_05795 ALC56_05795 ALC56_05595 ALC56_05595 ALC56_04167 ALC56_04167 ALC56_03968 ALC56_03968 ALC56_11525 ALC56_11525 ALC56_11182 ALC56_11182 ALC56_10728 ALC56_10728 ALC56_11321 ALC56_11321 ALC56_11936 ALC56_11936 ALC56_12168 ALC56_12168 ALC56_12083 ALC56_12083 ALC56_12558 ALC56_12558 ALC56_12157 ALC56_12157 ALC56_12603 ALC56_12603 ALC56_12501 ALC56_12501 ALC56_12983 ALC56_12983 ALC56_12976 ALC56_12976 ALC56_13114 ALC56_13114 ALC56_12833 ALC56_12833 ALC56_13239 ALC56_13239 ALC56_14942 ALC56_14942 ALC56_14615 ALC56_14615 ALC56_13343 ALC56_13343 ALC56_14518 ALC56_14518 ALC56_13794 ALC56_13794 ALC56_11818 ALC56_11818 ALC56_12908 ALC56_12908 ALC56_11651 ALC56_11651 ALC56_09977 ALC56_09977 ALC56_08193 ALC56_08193 ALC56_07700 ALC56_07700 ALC56_07734 ALC56_07734 ALC56_07728 ALC56_07728 ALC56_07714 ALC56_07714 ALC56_07480 ALC56_07480 ALC56_07194 ALC56_07194 ALC56_07005 ALC56_07005 ALC56_06992 ALC56_06992 ALC56_03352 ALC56_03352 ALC56_02991 ALC56_02991 ALC56_03037 ALC56_03037 ALC56_03049 ALC56_03049 ALC56_03355 ALC56_03355 ALC56_03036 ALC56_03036 ALC56_03601 ALC56_03601 ALC56_03544 ALC56_03544 ALC56_04425 ALC56_04425 ALC56_03833 ALC56_03833 ALC56_04353 ALC56_04353
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC56_05029DNA primase; Belongs to the eukaryotic-type primase small subunit family. (415 aa)
ALC56_05356TNFR-Cys domain-containing protein. (337 aa)
ALC56_05331DNA polymerase. (1470 aa)
ALC56_05752DNA replication factor Cdt1. (708 aa)
ALC56_05665DNA polymerase delta small subunit. (458 aa)
ALC56_05628Uncharacterized protein. (144 aa)
ALC56_06596Putative proteasome inhibitor. (281 aa)
ALC56_06807Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (596 aa)
ALC56_06466Anaphase-promoting complex subunit 2; Belongs to the cullin family. (775 aa)
ALC56_06849DNA polymerase delta subunit 2. (447 aa)
ALC56_0735626S proteasome non-ATPase regulatory subunit 6. (389 aa)
ALC56_07373Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (268 aa)
ALC56_07390Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (189 aa)
ALC56_07911Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (381 aa)
ALC56_07821DNA2-like helicase. (925 aa)
ALC56_08927DNA replication complex GINS protein PSF3. (202 aa)
ALC56_08887Replication factor C subunit 2. (354 aa)
Fen1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (381 aa)
ALC56_08812Cell division cycle protein 27 like protein. (849 aa)
ALC56_0278226S proteasome non-ATPase regulatory subunit 10. (235 aa)
ALC56_02787DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2243 aa)
ALC56_02076Uncharacterized protein. (308 aa)
ALC56_01853DNA polymerase epsilon subunit 3. (131 aa)
ALC56_01898Ubiquitin-60S ribosomal protein L40. (128 aa)
ALC56_01975Ubiquitin-conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family. (187 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (724 aa)
ALC56_01976KxDL domain-containing protein. (212 aa)
ALC56_00973Putative 26S proteasome non-ATPase regulatory subunit 3. (503 aa)
ALC56_01058Proteasome endopeptidase complex. (252 aa)
ALC56_01253Proteasome subunit beta type-7. (198 aa)
ALC56_01512Anaphase-promoting complex subunit 1. (2013 aa)
ALC56_00876S-phase kinase-associated protein 2. (703 aa)
ALC56_0072126S proteasome non-ATPase regulatory subunit 13. (385 aa)
ALC56_01255Replication factor C subunit 4. (370 aa)
ALC56_00360G1/S-specific cyclin-E; Belongs to the cyclin family. (351 aa)
ALC56_00580Replication factor C subunit 1. (1034 aa)
ALC56_00154Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (727 aa)
ALC56_0893126S proteasome non-ATPase regulatory subunit 9. (208 aa)
ALC56_08531DNA polymerase. (1078 aa)
ALC56_09383DNA replication licensing factor MCM9; Belongs to the MCM family. (629 aa)
ALC56_09810Anaphase-promoting complex subunit 5. (751 aa)
ALC56_09705Anaphase-promoting complex subunit 11. (161 aa)
ALC56_09635Anaphase-promoting complex subunit CDC26. (73 aa)
ALC56_09618DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (571 aa)
ALC56_09702DNA helicase; Belongs to the MCM family. (903 aa)
ALC56_09704Protein FAM89A. (593 aa)
ALC56_09786DNA polymerase delta subunit 3. (400 aa)
ALC56_10163Replication factor C subunit 3. (354 aa)
ALC56_10170Gamma-glutamylcyclotransferase. (170 aa)
ALC56_10701Proteasome subunit beta; Belongs to the peptidase T1B family. (253 aa)
ALC56_10307Cell division cycle protein 23 like protein. (586 aa)
ALC56_11218RING-box protein 1A. (200 aa)
ALC56_10893Cell division cycle protein 16 like protein. (661 aa)
ALC56_13257Polyubiquitin-A. (459 aa)
ALC56_13630Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (275 aa)
ALC56_13599DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (490 aa)
ALC56_13558DNA helicase; Belongs to the MCM family. (629 aa)
ALC56_1392826S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (893 aa)
ALC56_1340626S protease regulatory subunit 4; Belongs to the AAA ATPase family. (376 aa)
ALC56_1388526S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (891 aa)
ALC56_14280Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (247 aa)
ALC56_13802Ubiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family. (230 aa)
ALC56_14791DNA primase large subunit. (503 aa)
ALC56_14504Proteasome subunit beta type-6. (231 aa)
ALC56_14774Replication factor C subunit 5. (465 aa)
ALC56_03826Uncharacterized protein. (136 aa)
ALC56_01353Replication factor C subunit 1. (1148 aa)
ALC56_00925RCC1 and BTB domain-containing protein 1. (66 aa)
ALC56_00091Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (234 aa)
ALC56_00049RCC1 and BTB domain-containing protein 1. (124 aa)
ALC56_0008426S proteasome non-ATPase regulatory subunit 2. (534 aa)
ALC56_1512126S protease regulatory subunit 8; Belongs to the AAA ATPase family. (405 aa)
ALC56_15256Replication protein A 32 kDa subunit. (241 aa)
ALC56_1527926S proteasome non-ATPase regulatory subunit 5. (509 aa)
ALC56_15110DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (191 aa)
ALC56_1463926S proteasome non-ATPase regulatory subunit 8. (295 aa)
ALC56_15258Uncharacterized protein. (259 aa)
ALC56_1483726S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (393 aa)
ALC56_14902Uncharacterized protein C16orf73 like protein. (473 aa)
ALC56_0638626S protease regulatory subunit 7; Belongs to the AAA ATPase family. (434 aa)
ALC56_05795Transmembrane 7 superfamily member 3. (555 aa)
ALC56_0559526S proteasome non-ATPase regulatory subunit 4. (385 aa)
ALC56_04167RCC1 and BTB domain-containing protein 1. (458 aa)
ALC56_0396826S proteasome non-ATPase regulatory subunit 12. (453 aa)
ALC56_11525Proteasome subunit beta. (286 aa)
ALC56_11182S-phase kinase-associated protein 1; Belongs to the SKP1 family. (162 aa)
ALC56_10728DNA polymerase epsilon subunit 4. (122 aa)
ALC56_11321DNA helicase; Belongs to the MCM family. (843 aa)
ALC56_11936DNA helicase. (824 aa)
ALC56_12168Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (493 aa)
ALC56_12083Cullin-1; Belongs to the cullin family. (777 aa)
ALC56_12558Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family. (269 aa)
ALC56_12157Proteasome subunit beta. (204 aa)
ALC56_12603DNA replication licensing factor MCM8; Belongs to the MCM family. (702 aa)
ALC56_12501Flap endonuclease GEN. (737 aa)
ALC56_12983DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (216 aa)
ALC56_12976Origin recognition complex subunit 2. (553 aa)
ALC56_13114Proteasome activator complex subunit 4. (1876 aa)
ALC56_1283326S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (405 aa)
ALC56_13239Origin recognition complex subunit 3. (697 aa)
ALC56_14942Proteasome subunit beta. (207 aa)
ALC56_14615Uncharacterized protein. (115 aa)
ALC56_13343RCC1 and BTB domain-containing protein 1. (346 aa)
ALC56_14518X-linked retinitis pigmentosa GTPase regulator like protein. (1751 aa)
ALC56_13794BTB domain-containing protein. (149 aa)
ALC56_11818Ubiquitin-40S ribosomal protein S27a. (156 aa)
ALC56_12908RCC1 and BTB domain-containing protein 1. (390 aa)
ALC56_11651Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (560 aa)
ALC56_09977Polyubiquitin-A. (686 aa)
ALC56_08193Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (246 aa)
ALC56_07700RCC1 and BTB domain-containing protein 1. (947 aa)
ALC56_07734Cell division protein kinase 2; Belongs to the protein kinase superfamily. (312 aa)
ALC56_07728DNA helicase; Belongs to the MCM family. (813 aa)
ALC56_07714RCC1 and BTB domain-containing protein 1. (280 aa)
ALC56_0748026S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (1016 aa)
ALC56_07194Anaphase-promoting complex subunit 4. (679 aa)
ALC56_07005RCC1 and BTB domain-containing protein 1. (553 aa)
ALC56_06992RCC1 and BTB domain-containing protein 1. (332 aa)
ALC56_0335226S proteasome non-ATPase regulatory subunit 7. (320 aa)
ALC56_02991Anaphase-promoting complex subunit 7. (572 aa)
ALC56_03037Proteasome activator complex subunit 3. (214 aa)
ALC56_03049Putative DNA primase large subunit. (416 aa)
ALC56_03355DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (569 aa)
ALC56_0303626S proteasome non-ATPase regulatory subunit 11. (423 aa)
ALC56_03601DNA replication complex GINS protein PSF1. (194 aa)
ALC56_0354426S proteasome non-ATPase regulatory subunit 14. (319 aa)
ALC56_04425DNA ligase. (1012 aa)
ALC56_03833Uncharacterized protein. (136 aa)
ALC56_04353Cyclin-A2; Belongs to the cyclin family. (481 aa)
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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