20 items (Trachymyrmex septentrionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC56_13739	Vitellogenin receptor. (1645 aa)
	ALC56_00704	Basement membrane-specific heparan sulfate proteoglycan core protein. (3257 aa)
	ALC56_00984	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (219 aa)
	ALC56_01976	KxDL domain-containing protein. (212 aa)
	ALC56_01898	Ubiquitin-60S ribosomal protein L40. (128 aa)
	ALC56_03401	AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (442 aa)
	ALC56_07433	AP complex subunit beta. (917 aa)
	ALC56_08968	Clathrin heavy chain. (1664 aa)
	ALC56_08767	Very low-density lipoprotein receptor. (1105 aa)
	ALC56_09723	E3 ubiquitin-protein ligase MYLIP. (449 aa)
	ALC56_10170	Gamma-glutamylcyclotransferase. (170 aa)
	ALC56_13257	Polyubiquitin-A. (459 aa)
	ALC56_13843	Uncharacterized protein. (791 aa)
	ALC56_14464	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (122 aa)
	ALC56_09858	Ecdysone receptor. (213 aa)
	ALC56_09861	Uncharacterized protein. (104 aa)
	ALC56_09977	Polyubiquitin-A. (686 aa)
	ALC56_09860	Ecdysone receptor. (54 aa)
	ALC56_14051	AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles. (939 aa)
	ALC56_11818	Ubiquitin-40S ribosomal protein S27a. (156 aa)

Your Current Organism:

Trachymyrmex septentrionalis

NCBI taxonomy Id: 34720
Other names: T. septentrionalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC56_00704	ALC56_08767	A0A195FXZ6	A0A195F9C0	Basement membrane-specific heparan sulfate proteoglycan core protein.	Very low-density lipoprotein receptor.	0.833
ALC56_00704	ALC56_13739	A0A195FXZ6	A0A195EV07	Basement membrane-specific heparan sulfate proteoglycan core protein.	Vitellogenin receptor.	0.799
ALC56_00704	ALC56_13843	A0A195FXZ6	A0A195EUZ4	Basement membrane-specific heparan sulfate proteoglycan core protein.	Uncharacterized protein.	0.512
ALC56_00984	ALC56_01898	A0A195FVU1	A0A195FT85	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Ubiquitin-60S ribosomal protein L40.	0.708
ALC56_00984	ALC56_03401	A0A195FVU1	A0A195FP83	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.967
ALC56_00984	ALC56_07433	A0A195FVU1	A0A195FDW1	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP complex subunit beta.	0.991
ALC56_00984	ALC56_08767	A0A195FVU1	A0A195F9C0	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Very low-density lipoprotein receptor.	0.666
ALC56_00984	ALC56_08968	A0A195FVU1	A0A195FAE3	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Clathrin heavy chain.	0.999
ALC56_00984	ALC56_09977	A0A195FVU1	A0A151JU99	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Polyubiquitin-A.	0.673
ALC56_00984	ALC56_10170	A0A195FVU1	A0A195F4U9	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Gamma-glutamylcyclotransferase.	0.686
ALC56_00984	ALC56_11818	A0A195FVU1	A0A151JTF5	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Ubiquitin-40S ribosomal protein S27a.	0.705
ALC56_00984	ALC56_13257	A0A195FVU1	A0A195EVV9	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Polyubiquitin-A.	0.673
ALC56_00984	ALC56_13739	A0A195FVU1	A0A195EV07	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Vitellogenin receptor.	0.685
ALC56_00984	ALC56_13843	A0A195FVU1	A0A195EUZ4	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Uncharacterized protein.	0.570
ALC56_00984	ALC56_14051	A0A195FVU1	A0A151JTU0	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles.	0.982
ALC56_00984	ALC56_14464	A0A195FVU1	A0A195ESR2	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.955
ALC56_01898	ALC56_00984	A0A195FT85	A0A195FVU1	Ubiquitin-60S ribosomal protein L40.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.708
ALC56_01898	ALC56_03401	A0A195FT85	A0A195FP83	Ubiquitin-60S ribosomal protein L40.	AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.707
ALC56_01898	ALC56_07433	A0A195FT85	A0A195FDW1	Ubiquitin-60S ribosomal protein L40.	AP complex subunit beta.	0.695
ALC56_01898	ALC56_09723	A0A195FT85	A0A195F6W3	Ubiquitin-60S ribosomal protein L40.	E3 ubiquitin-protein ligase MYLIP.	0.798