48 items (Trachymyrmex septentrionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC56_06386	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (434 aa)
	ALC56_07480	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (1016 aa)
	ALC56_08193	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (246 aa)
	ALC56_09977	Polyubiquitin-A. (686 aa)
	ALC56_11818	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	ALC56_01898	Ubiquitin-60S ribosomal protein L40. (128 aa)
	ALC56_00973	Putative 26S proteasome non-ATPase regulatory subunit 3. (503 aa)
	ALC56_01058	Proteasome endopeptidase complex. (252 aa)
	ALC56_01253	Proteasome subunit beta type-7. (198 aa)
	ALC56_01114	Protein 60A. (418 aa)
	ALC56_00721	26S proteasome non-ATPase regulatory subunit 13. (385 aa)
	ALC56_03968	26S proteasome non-ATPase regulatory subunit 12. (453 aa)
	ALC56_00091	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (234 aa)
	ALC56_00084	26S proteasome non-ATPase regulatory subunit 2. (534 aa)
	ALC56_15121	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (405 aa)
	ALC56_15279	26S proteasome non-ATPase regulatory subunit 5. (509 aa)
	ALC56_14639	26S proteasome non-ATPase regulatory subunit 8. (295 aa)
	ALC56_15185	Protein decapentaplegic. (400 aa)
	ALC56_14837	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (393 aa)
	ALC56_14942	Proteasome subunit beta. (207 aa)
	ALC56_14504	Proteasome subunit beta type-6. (231 aa)
	ALC56_14280	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (247 aa)
	ALC56_13885	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (891 aa)
	ALC56_13406	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (376 aa)
	ALC56_13928	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (893 aa)
	ALC56_13257	Polyubiquitin-A. (459 aa)
	ALC56_12833	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (405 aa)
	ALC56_12760	Segmentation protein Runt. (346 aa)
	ALC56_12157	Proteasome subunit beta. (204 aa)
	ALC56_11525	Proteasome subunit beta. (286 aa)
	ALC56_10701	Proteasome subunit beta; Belongs to the peptidase T1B family. (253 aa)
	ALC56_10133	E3 ubiquitin-protein ligase SMURF2. (899 aa)
	ALC56_09363	Proteasome subunit beta type-1. (190 aa)
	ALC56_08931	26S proteasome non-ATPase regulatory subunit 9. (208 aa)
	ALC56_07881	Protein big brother. (287 aa)
	ALC56_07911	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (381 aa)
	ALC56_07667	CREB-binding protein. (2178 aa)
	ALC56_07656	Bone morphogenetic protein 6. (182 aa)
	ALC56_07373	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. (268 aa)
	ALC56_05595	26S proteasome non-ATPase regulatory subunit 4. (385 aa)
	ALC56_07356	26S proteasome non-ATPase regulatory subunit 6. (389 aa)
	ALC56_06596	Putative proteasome inhibitor. (281 aa)
	ALC56_03544	26S proteasome non-ATPase regulatory subunit 14. (319 aa)
	ALC56_03036	26S proteasome non-ATPase regulatory subunit 11. (423 aa)
	ALC56_03037	Proteasome activator complex subunit 3. (214 aa)
	ALC56_03352	26S proteasome non-ATPase regulatory subunit 7. (320 aa)
	ALC56_02782	26S proteasome non-ATPase regulatory subunit 10. (235 aa)
	ALC56_02076	Uncharacterized protein. (308 aa)

Your Current Organism:

Trachymyrmex septentrionalis

NCBI taxonomy Id: 34720
Other names: T. septentrionalis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC56_00084	ALC56_00091	A0A151K3Q9	A0A151K3J4	26S proteasome non-ATPase regulatory subunit 2.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.979
ALC56_00084	ALC56_00721	A0A151K3Q9	A0A195FWC4	26S proteasome non-ATPase regulatory subunit 2.	26S proteasome non-ATPase regulatory subunit 13.	0.989
ALC56_00084	ALC56_00973	A0A151K3Q9	A0A195FV61	26S proteasome non-ATPase regulatory subunit 2.	Putative 26S proteasome non-ATPase regulatory subunit 3.	0.994
ALC56_00084	ALC56_01058	A0A151K3Q9	A0A195FVE7	26S proteasome non-ATPase regulatory subunit 2.	Proteasome endopeptidase complex.	0.982
ALC56_00084	ALC56_01253	A0A151K3Q9	A0A195FVF9	26S proteasome non-ATPase regulatory subunit 2.	Proteasome subunit beta type-7.	0.981
ALC56_00084	ALC56_01898	A0A151K3Q9	A0A195FT85	26S proteasome non-ATPase regulatory subunit 2.	Ubiquitin-60S ribosomal protein L40.	0.968
ALC56_00084	ALC56_02076	A0A151K3Q9	A0A195FRW6	26S proteasome non-ATPase regulatory subunit 2.	Uncharacterized protein.	0.989
ALC56_00084	ALC56_02782	A0A151K3Q9	A0A195FRR3	26S proteasome non-ATPase regulatory subunit 2.	26S proteasome non-ATPase regulatory subunit 10.	0.943
ALC56_00084	ALC56_03036	A0A151K3Q9	A0A195FPH6	26S proteasome non-ATPase regulatory subunit 2.	26S proteasome non-ATPase regulatory subunit 11.	0.995
ALC56_00084	ALC56_03037	A0A151K3Q9	A0A195FPZ9	26S proteasome non-ATPase regulatory subunit 2.	Proteasome activator complex subunit 3.	0.766
ALC56_00084	ALC56_03352	A0A151K3Q9	A0A195FQL4	26S proteasome non-ATPase regulatory subunit 2.	26S proteasome non-ATPase regulatory subunit 7.	0.989
ALC56_00084	ALC56_03544	A0A151K3Q9	A0A195FNH8	26S proteasome non-ATPase regulatory subunit 2.	26S proteasome non-ATPase regulatory subunit 14.	0.995
ALC56_00084	ALC56_03968	A0A151K3Q9	A0A151JYU3	26S proteasome non-ATPase regulatory subunit 2.	26S proteasome non-ATPase regulatory subunit 12.	0.994
ALC56_00084	ALC56_05595	A0A151K3Q9	A0A151JXW3	26S proteasome non-ATPase regulatory subunit 2.	26S proteasome non-ATPase regulatory subunit 4.	0.994
ALC56_00084	ALC56_06386	A0A151K3Q9	A0A151JWT7	26S proteasome non-ATPase regulatory subunit 2.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.988
ALC56_00084	ALC56_06596	A0A151K3Q9	A0A195FER9	26S proteasome non-ATPase regulatory subunit 2.	Putative proteasome inhibitor.	0.591
ALC56_00084	ALC56_07356	A0A151K3Q9	A0A195FD56	26S proteasome non-ATPase regulatory subunit 2.	26S proteasome non-ATPase regulatory subunit 6.	0.989
ALC56_00084	ALC56_07373	A0A151K3Q9	A0A195FD54	26S proteasome non-ATPase regulatory subunit 2.	Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.	0.986
ALC56_00084	ALC56_07480	A0A151K3Q9	A0A151JW54	26S proteasome non-ATPase regulatory subunit 2.	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.	0.996
ALC56_00084	ALC56_07911	A0A151K3Q9	A0A195FBY0	26S proteasome non-ATPase regulatory subunit 2.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.984