9 items (Trachymyrmex septentrionalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALC56_13257	Polyubiquitin-A. (459 aa)
	ALC56_01898	Ubiquitin-60S ribosomal protein L40. (128 aa)
	ALC56_05219	TNF receptor-associated factor 6. (405 aa)
	ALC56_11818	Ubiquitin-40S ribosomal protein S27a. (156 aa)
	ALC56_09977	Polyubiquitin-A. (686 aa)
	ALC56_14867	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (151 aa)
	ALC56_14481	Protein pellino. (467 aa)
	ALC56_14355	Ubiquitin-conjugating enzyme E2 variant 2. (144 aa)
	ALC56_13946	Inhibitor of nuclear factor kappa-B kinase subunit beta. (636 aa)

Your Current Organism:

Trachymyrmex septentrionalis

NCBI taxonomy Id: 34720
Other names: T. septentrionalis

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALC56_01898	ALC56_05219	A0A195FT85	A0A195FJU3	Ubiquitin-60S ribosomal protein L40.	TNF receptor-associated factor 6.	0.974
ALC56_01898	ALC56_09977	A0A195FT85	A0A151JU99	Ubiquitin-60S ribosomal protein L40.	Polyubiquitin-A.	0.993
ALC56_01898	ALC56_11818	A0A195FT85	A0A151JTF5	Ubiquitin-60S ribosomal protein L40.	Ubiquitin-40S ribosomal protein S27a.	0.999
ALC56_01898	ALC56_13257	A0A195FT85	A0A195EVV9	Ubiquitin-60S ribosomal protein L40.	Polyubiquitin-A.	0.986
ALC56_01898	ALC56_13946	A0A195FT85	A0A195EV87	Ubiquitin-60S ribosomal protein L40.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.793
ALC56_01898	ALC56_14355	A0A195FT85	A0A195EUB7	Ubiquitin-60S ribosomal protein L40.	Ubiquitin-conjugating enzyme E2 variant 2.	0.980
ALC56_01898	ALC56_14867	A0A195FT85	A0A195ES24	Ubiquitin-60S ribosomal protein L40.	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.997
ALC56_05219	ALC56_01898	A0A195FJU3	A0A195FT85	TNF receptor-associated factor 6.	Ubiquitin-60S ribosomal protein L40.	0.974
ALC56_05219	ALC56_09977	A0A195FJU3	A0A151JU99	TNF receptor-associated factor 6.	Polyubiquitin-A.	0.973
ALC56_05219	ALC56_11818	A0A195FJU3	A0A151JTF5	TNF receptor-associated factor 6.	Ubiquitin-40S ribosomal protein S27a.	0.977
ALC56_05219	ALC56_13257	A0A195FJU3	A0A195EVV9	TNF receptor-associated factor 6.	Polyubiquitin-A.	0.973
ALC56_05219	ALC56_13946	A0A195FJU3	A0A195EV87	TNF receptor-associated factor 6.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.958
ALC56_05219	ALC56_14355	A0A195FJU3	A0A195EUB7	TNF receptor-associated factor 6.	Ubiquitin-conjugating enzyme E2 variant 2.	0.888
ALC56_05219	ALC56_14481	A0A195FJU3	A0A195ESL1	TNF receptor-associated factor 6.	Protein pellino.	0.940
ALC56_05219	ALC56_14867	A0A195FJU3	A0A195ES24	TNF receptor-associated factor 6.	Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.	0.997
ALC56_09977	ALC56_01898	A0A151JU99	A0A195FT85	Polyubiquitin-A.	Ubiquitin-60S ribosomal protein L40.	0.993
ALC56_09977	ALC56_05219	A0A151JU99	A0A195FJU3	Polyubiquitin-A.	TNF receptor-associated factor 6.	0.973
ALC56_09977	ALC56_11818	A0A151JU99	A0A151JTF5	Polyubiquitin-A.	Ubiquitin-40S ribosomal protein S27a.	0.989
ALC56_09977	ALC56_13946	A0A151JU99	A0A195EV87	Polyubiquitin-A.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.760
ALC56_09977	ALC56_14355	A0A151JU99	A0A195EUB7	Polyubiquitin-A.	Ubiquitin-conjugating enzyme E2 variant 2.	0.980