STRINGSTRING
ALC56_00226 ALC56_00226 ALC56_00568 ALC56_00568 ALC56_01029 ALC56_01029 ALC56_01031 ALC56_01031 ALC56_00981 ALC56_00981 ALC56_01708 ALC56_01708 ALC56_01976 ALC56_01976 ALC56_01535 ALC56_01535 ALC56_02205 ALC56_02205 ALC56_01706 ALC56_01706 ALC56_01589 ALC56_01589 ALC56_01723 ALC56_01723 ALC56_01793 ALC56_01793 ALC56_01898 ALC56_01898 ALC56_02043 ALC56_02043 ALC56_01792 ALC56_01792 ALC56_01796 ALC56_01796 ALC56_02226 ALC56_02226 ALC56_02106 ALC56_02106 ALC56_02807 ALC56_02807 ALC56_02685 ALC56_02685 ALC56_02654 ALC56_02654 ALC56_02686 ALC56_02686 ALC56_02962 ALC56_02962 ALC56_02966 ALC56_02966 ALC56_03555 ALC56_03555 ALC56_03735 ALC56_03735 ALC56_04337 ALC56_04337 ALC56_04269 ALC56_04269 ALC56_04238 ALC56_04238 ALC56_04564 ALC56_04564 ALC56_04873 ALC56_04873 ALC56_04336 ALC56_04336 ALC56_04326 ALC56_04326 ALC56_05339 ALC56_05339 ALC56_04613 ALC56_04613 ALC56_05012 ALC56_05012 ALC56_05054 ALC56_05054 ALC56_04896 ALC56_04896 ALC56_04695 ALC56_04695 ALC56_05347 ALC56_05347 ALC56_05381 ALC56_05381 ALC56_05338 ALC56_05338 ALC56_05335 ALC56_05335 ALC56_06863 ALC56_06863 ALC56_06539 ALC56_06539 ALC56_06469 ALC56_06469 ALC56_06606 ALC56_06606 ALC56_07399 ALC56_07399 ALC56_07339 ALC56_07339 ALC56_07434 ALC56_07434 ALC56_08071 ALC56_08071 ALC56_07908 ALC56_07908 ALC56_07831 ALC56_07831 ALC56_07654 ALC56_07654 ALC56_07900 ALC56_07900 ALC56_08963 ALC56_08963 ALC56_08967 ALC56_08967 ALC56_08814 ALC56_08814 ALC56_08966 ALC56_08966 ALC56_08722 ALC56_08722 ALC56_08592 ALC56_08592 ALC56_09755 ALC56_09755 ALC56_10168 ALC56_10168 ALC56_10243 ALC56_10243 ALC56_10433 ALC56_10433 ALC56_10991 ALC56_10991 ALC56_10707 ALC56_10707 ALC56_10796 ALC56_10796 ALC56_11326 ALC56_11326 ALC56_11310 ALC56_11310 ALC56_11579 ALC56_11579 ALC56_11246 ALC56_11246 ALC56_11984 ALC56_11984 ALC56_12169 ALC56_12169 ALC56_12268 ALC56_12268 ALC56_12431 ALC56_12431 ALC56_12832 ALC56_12832 ALC56_12624 ALC56_12624 ALC56_13040 ALC56_13040 ALC56_13020 ALC56_13020 ALC56_12901 ALC56_12901 ALC56_12964 ALC56_12964 ALC56_13548 ALC56_13548 ALC56_13759 ALC56_13759 ALC56_13803 ALC56_13803 ALC56_14230 ALC56_14230 ALC56_14106 ALC56_14106 ALC56_14153 ALC56_14153 ALC56_14480 ALC56_14480 ALC56_14483 ALC56_14483 ALC56_14790 ALC56_14790 ALC56_15257 ALC56_15257 ALC56_00269 ALC56_00269 ALC56_00294 ALC56_00294 ALC56_02529 ALC56_02529 ALC56_03709 ALC56_03709 ALC56_03699 ALC56_03699 ALC56_04805 ALC56_04805 ALC56_05891 ALC56_05891 ALC56_08173 ALC56_08173 ALC56_08141 ALC56_08141 ALC56_08210 ALC56_08210 ALC56_08273 ALC56_08273 ALC56_09466 ALC56_09466 ALC56_11828 ALC56_11828 ALC56_15071 ALC56_15071
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC56_0022660S ribosomal protein L4. (415 aa)
ALC56_0056860S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family. (254 aa)
ALC56_0102960S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (142 aa)
ALC56_0103160S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
ALC56_0098140S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (311 aa)
ALC56_0170860S ribosomal protein L35a. (133 aa)
ALC56_01976KxDL domain-containing protein. (212 aa)
ALC56_01535Protein SMG8. (908 aa)
ALC56_02205Protein mago nashi. (146 aa)
ALC56_0170640S ribosomal protein S26. (251 aa)
ALC56_01589Ribosomal protein L37; Binds to the 23S rRNA. (101 aa)
ALC56_01723Eukaryotic peptide chain release factor subunit 1. (437 aa)
ALC56_0179360S ribosomal protein L7. (256 aa)
ALC56_01898Ubiquitin-60S ribosomal protein L40. (128 aa)
ALC56_0204340S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
ALC56_01792General transcription factor 3C polypeptide 2. (1423 aa)
ALC56_0179660S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (280 aa)
ALC56_0222660S ribosomal protein L8. (257 aa)
ALC56_0210640S ribosomal protein S29. (85 aa)
ALC56_0280740S ribosomal protein S19a. (154 aa)
ALC56_02685Uncharacterized protein. (965 aa)
ALC56_0265460S ribosomal protein L35. (106 aa)
ALC56_0268640S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (149 aa)
ALC56_02962Protein SMG5. (1065 aa)
ALC56_0296660S ribosomal protein L10a. (304 aa)
ALC56_0355540S ribosomal protein S28. (65 aa)
ALC56_03735Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (199 aa)
ALC56_04337Uncharacterized protein. (1001 aa)
ALC56_0426940S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (130 aa)
ALC56_0423860S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (235 aa)
ALC56_0456440S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (165 aa)
ALC56_0487360S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (153 aa)
ALC56_0433640S ribosomal protein S6. (251 aa)
ALC56_0432640S ribosomal protein S17. (148 aa)
ALC56_05339Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (679 aa)
ALC56_0461340S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (151 aa)
ALC56_0501240S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
ALC56_05054Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family. (3461 aa)
ALC56_04896Protein CASC3. (792 aa)
ALC56_04695Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (469 aa)
ALC56_05347Regulator of nonsense transcripts 3A. (701 aa)
ALC56_05381Uncharacterized protein CXorf41. (195 aa)
ALC56_05338Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
ALC56_05335Uncharacterized protein. (57 aa)
ALC56_0686360S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (76 aa)
ALC56_0653960S ribosomal protein L18. (220 aa)
ALC56_0646940S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (276 aa)
ALC56_0660640S ribosomal protein S10. (159 aa)
ALC56_0739940S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
ALC56_0733940S ribosomal protein S3. (243 aa)
ALC56_0743440S ribosomal protein S27. (85 aa)
ALC56_0807160S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (318 aa)
ALC56_07908Eukaryotic peptide chain release factor GTP-binding subunit ERF3A. (621 aa)
ALC56_0783140S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (143 aa)
ALC56_0765460S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (118 aa)
ALC56_0790040S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (256 aa)
ALC56_0896340S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (129 aa)
ALC56_0896760S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
ALC56_0881440S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
ALC56_08966Uncharacterized protein. (950 aa)
ALC56_0872240S ribosomal protein S25. (182 aa)
ALC56_0859260S ribosomal protein L24. (158 aa)
ALC56_0975540S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (159 aa)
ALC56_1016860S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (219 aa)
ALC56_1024360S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (192 aa)
ALC56_10433Telomerase-binding protein EST1A. (1698 aa)
ALC56_10991Nonsense-mediated mRNA decay protein 2. (1109 aa)
ALC56_1070760S ribosomal protein L7a. (268 aa)
ALC56_1079640S ribosomal protein S3. (226 aa)
ALC56_1132660S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (134 aa)
ALC56_1131040S ribosomal protein S4. (260 aa)
ALC56_1157960S ribosomal protein L28. (117 aa)
ALC56_11246Protein SMG7. (1167 aa)
ALC56_1198440S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (218 aa)
ALC56_1216960S ribosomal protein L22. (134 aa)
ALC56_1226860S ribosomal protein L34. (119 aa)
ALC56_12431Regulator of nonsense transcripts 1. (1120 aa)
ALC56_12832RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (157 aa)
ALC56_1262460S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (199 aa)
ALC56_1304040S ribosomal protein S20. (94 aa)
ALC56_1302040S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
ALC56_12901Uncharacterized protein. (234 aa)
ALC56_1296460S ribosomal protein L26. (108 aa)
ALC56_1354860S ribosomal protein L30. (139 aa)
ALC56_13759Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform. (593 aa)
ALC56_13803ADP-ribosylation factor-like protein 6-interacting protein 1. (204 aa)
ALC56_14230UPF0544 protein C5orf45 like protein. (206 aa)
ALC56_14106Protein SMG9. (399 aa)
ALC56_1415340S ribosomal protein S19a. (153 aa)
ALC56_1448060S ribosomal protein L32. (136 aa)
ALC56_14483Nuclear cap-binding protein subunit 1. (774 aa)
ALC56_14790RNA-binding protein with serine-rich domain 1. (379 aa)
ALC56_1525740S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
ALC56_0026960S ribosomal protein L31. (123 aa)
ALC56_00294mRNA-decapping enzyme 1B. (453 aa)
ALC56_02529Uncharacterized protein. (65 aa)
ALC56_03709Proline-rich nuclear receptor coactivator 2. (168 aa)
ALC56_0369960S ribosomal protein L9. (219 aa)
ALC56_0480540S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (193 aa)
ALC56_05891Serine/threonine-protein phosphatase. (336 aa)
ALC56_08173Eukaryotic initiation factor 4A-III. (407 aa)
ALC56_0814160S ribosomal protein L5. (296 aa)
ALC56_0821040S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (193 aa)
ALC56_0827360S ribosomal protein L21. (159 aa)
ALC56_0946660S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (414 aa)
ALC56_1182860S ribosomal protein L10. (219 aa)
ALC56_15071Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] (165 aa)
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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