STRINGSTRING
ALC56_03401 ALC56_03401 ALC56_14464 ALC56_14464 ALC56_11743 ALC56_11743 ALC56_11048 ALC56_11048 ALC56_09251 ALC56_09251 ALC56_07988 ALC56_07988 ALC56_05010 ALC56_05010 ALC56_00440 ALC56_00440
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALC56_03401AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (442 aa)
ALC56_14464AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (122 aa)
ALC56_11743AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (152 aa)
ALC56_11048Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (535 aa)
ALC56_09251AP-3 complex subunit sigma-2. (234 aa)
ALC56_07988AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (417 aa)
ALC56_05010Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (172 aa)
ALC56_00440AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (422 aa)
Your Current Organism:
Trachymyrmex septentrionalis
NCBI taxonomy Id: 34720
Other names: T. septentrionalis
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