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lpdA lpdA citB1 citB1 mdh mdh dsa dsa oxdhB oxdhB oxdhA1 oxdhA1 korA korA korB1 korB1 citZ citZ citB2 citB2 icd icd oxdhA2 oxdhA2 fumC fumC porB porB porA porA sdhA sdhA sdhB sdhB sdhD sdhD sdhC sdhC sucD sucD sucC sucC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lpdADihydrolipoyl dehydrogenase. (474 aa)
citB1Aconitate hydratase. (657 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. (304 aa)
dsaDihydrolipoamide S-acyltransferase. (516 aa)
oxdhB2-oxo-3-methylvalerate dehydrogenase E1 component beta subunit. (329 aa)
oxdhA12-oxo-3-methylvalerate dehydrogenase E1 component alpha subunit. (374 aa)
korAOxoglutarate--ferredoxin oxidoreductase alpha subunit. (587 aa)
korB1Oxoglutarate--ferredoxin oxidoreductase beta subunit. (289 aa)
citZCitrate synthase; Unknown EC_number=2.3.3.16. (378 aa)
citB2Aconitate hydratase. (917 aa)
icdIsocitrate dehydrogenase (NADP). (418 aa)
oxdhA2Probable 2-oxoacid dehydrogenase E1 component alpha subunit. (379 aa)
fumCFumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (471 aa)
porBPyruvate--ferredoxin oxidoreductase beta subunit. (311 aa)
porAPyruvate--ferredoxin oxidoreductase alpha subunit. (629 aa)
sdhASuccinate dehydrogenase subunit A; Deleted EC_number 1.3.99.1. (611 aa)
sdhBSuccinate dehydrogenase subunit B; Deleted EC_number 1.3.99.1. (287 aa)
sdhDSuccinate dehydrogenase subunit D; Deleted EC_number 1.3.99.1. (121 aa)
sdhCSuccinate dehydrogenase subunit C; Deleted EC_number 1.3.99.1. (130 aa)
sucDsuccinate--CoA ligase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (289 aa)
sucCsuccinate--CoA ligase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (380 aa)
Your Current Organism:
Natronomonas pharaonis
NCBI taxonomy Id: 348780
Other names: N. pharaonis DSM 2160, Natronomonas pharaonis ATCC 35678, Natronomonas pharaonis DSM 2160, Natronomonas pharaonis Gabara, Natronomonas pharaonis JCM 8858, Natronomonas pharaonis str. DSM 2160, Natronomonas pharaonis strain DSM 2160
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