STRINGSTRING
lpdA lpdA acs5 acs5 mmcA2 mmcA2 mce mce acaB8 acaB8 mmcA1 mmcA1 acaB1 acaB1 mmcB mmcB acdA acdA acaB3 acaB3 acaB4 acaB4 acaB7 acaB7 porB porB porA porA acs1 acs1 acs2 acs2 pccA1 pccA1 sucD sucD sucC sucC pccB2 pccB2 pccX pccX pccA2 pccA2 NP_4820A NP_4820A acs3 acs3 acs4 acs4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lpdADihydrolipoyl dehydrogenase. (474 aa)
acs5acyl-CoA synthetase. (544 aa)
mmcA2methylmalonyl-CoA mutase subunit A. (556 aa)
mcemethylmalonyl-CoA epimerase. (127 aa)
acaB8acetyl-CoA C-acyltransferase. (388 aa)
mmcA1methylmalonyl-CoA mutase subunit A. (561 aa)
acaB1acetyl-CoA C-acyltransferase. (393 aa)
mmcBmethylmalonyl-CoA mutase subunit B (cobalamin-binding subunit). (138 aa)
acdAacetate--CoA ligase (ADP-forming). (697 aa)
acaB3acetyl-CoA C-acyltransferase. (389 aa)
acaB4acetyl-CoA C-acetyltransferase. (384 aa)
acaB7acetyl-CoA C-acetyltransferase catalytic subunit. (384 aa)
porBPyruvate--ferredoxin oxidoreductase beta subunit. (311 aa)
porAPyruvate--ferredoxin oxidoreductase alpha subunit. (629 aa)
acs1acyl-CoA synthetase. (655 aa)
acs2acyl-CoA synthetase. (560 aa)
pccA1propionyl-CoA carboxylase biotin carboxylase component. (582 aa)
sucDsuccinate--CoA ligase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (289 aa)
sucCsuccinate--CoA ligase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (380 aa)
pccB2propionyl-CoA carboxylase carboxyltransferase component. (516 aa)
pccXpropionyl-CoA carboxylase small subunit. (80 aa)
pccA2propionyl-CoA carboxylase biotin carboxylase component. (613 aa)
NP_4820APrpD family protein. (414 aa)
acs3acyl-CoA synthetase. (662 aa)
acs4acyl-CoA synthetase. (657 aa)
Your Current Organism:
Natronomonas pharaonis
NCBI taxonomy Id: 348780
Other names: N. pharaonis DSM 2160, Natronomonas pharaonis ATCC 35678, Natronomonas pharaonis DSM 2160, Natronomonas pharaonis Gabara, Natronomonas pharaonis JCM 8858, Natronomonas pharaonis str. DSM 2160, Natronomonas pharaonis strain DSM 2160
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