10 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_11135	Uncharacterized protein. (679 aa)
	PV05_06179	Uncharacterized protein. (255 aa)
	PV05_11651	Uncharacterized protein. (711 aa)
	PV05_10448	E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family. (165 aa)
	PV05_03550	Uncharacterized protein. (968 aa)
	PV05_10712	CULLIN_2 domain-containing protein; Belongs to the cullin family. (778 aa)
	PV05_08112	F-box domain-containing protein. (959 aa)
	PV05_10552	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (253 aa)
	PV05_03450	Uncharacterized protein. (1081 aa)
	PV05_03722	Uncharacterized protein. (683 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_03450	PV05_03550	A0A0D2EW10	A0A0D2D9X6	Uncharacterized protein.	Uncharacterized protein.	0.829
PV05_03450	PV05_03722	A0A0D2EW10	A0A0D2FGK3	Uncharacterized protein.	Uncharacterized protein.	0.827
PV05_03450	PV05_06179	A0A0D2EW10	A0A0D2BMK8	Uncharacterized protein.	Uncharacterized protein.	0.981
PV05_03450	PV05_08112	A0A0D2EW10	A0A0D2EAZ7	Uncharacterized protein.	F-box domain-containing protein.	0.879
PV05_03450	PV05_10448	A0A0D2EW10	A0A0D2CP77	Uncharacterized protein.	E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.	0.997
PV05_03450	PV05_10552	A0A0D2EW10	A0A0D2EB21	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.891
PV05_03450	PV05_10712	A0A0D2EW10	A0A0D2E0S4	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.982
PV05_03450	PV05_11135	A0A0D2EW10	A0A0D2BBC3	Uncharacterized protein.	Uncharacterized protein.	0.765
PV05_03450	PV05_11651	A0A0D2EW10	A0A0D2CJP7	Uncharacterized protein.	Uncharacterized protein.	0.833
PV05_03550	PV05_03450	A0A0D2D9X6	A0A0D2EW10	Uncharacterized protein.	Uncharacterized protein.	0.829
PV05_03550	PV05_03722	A0A0D2D9X6	A0A0D2FGK3	Uncharacterized protein.	Uncharacterized protein.	0.811
PV05_03550	PV05_06179	A0A0D2D9X6	A0A0D2BMK8	Uncharacterized protein.	Uncharacterized protein.	0.930
PV05_03550	PV05_08112	A0A0D2D9X6	A0A0D2EAZ7	Uncharacterized protein.	F-box domain-containing protein.	0.753
PV05_03550	PV05_10448	A0A0D2D9X6	A0A0D2CP77	Uncharacterized protein.	E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.	0.930
PV05_03550	PV05_10552	A0A0D2D9X6	A0A0D2EB21	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.732
PV05_03550	PV05_10712	A0A0D2D9X6	A0A0D2E0S4	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.929
PV05_03550	PV05_11135	A0A0D2D9X6	A0A0D2BBC3	Uncharacterized protein.	Uncharacterized protein.	0.720
PV05_03722	PV05_03450	A0A0D2FGK3	A0A0D2EW10	Uncharacterized protein.	Uncharacterized protein.	0.827
PV05_03722	PV05_03550	A0A0D2FGK3	A0A0D2D9X6	Uncharacterized protein.	Uncharacterized protein.	0.811
PV05_03722	PV05_06179	A0A0D2FGK3	A0A0D2BMK8	Uncharacterized protein.	Uncharacterized protein.	0.979