5 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_07899	Cir_N domain-containing protein. (392 aa)
	PV05_06559	Uncharacterized protein. (298 aa)
	PV05_05348	Cwf21 domain-containing protein. (180 aa)
	PV05_10068	Uncharacterized protein. (990 aa)
	PV05_03213	Slu7 domain-containing protein. (502 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_03213	PV05_05348	A0A0D2FF15	A0A0D2D2S7	Slu7 domain-containing protein.	Cwf21 domain-containing protein.	0.975
PV05_03213	PV05_06559	A0A0D2FF15	A0A0D2CVP7	Slu7 domain-containing protein.	Uncharacterized protein.	0.939
PV05_03213	PV05_07899	A0A0D2FF15	A0A0D2BIQ3	Slu7 domain-containing protein.	Cir_N domain-containing protein.	0.944
PV05_03213	PV05_10068	A0A0D2FF15	A0A0D2E9J7	Slu7 domain-containing protein.	Uncharacterized protein.	0.998
PV05_05348	PV05_03213	A0A0D2D2S7	A0A0D2FF15	Cwf21 domain-containing protein.	Slu7 domain-containing protein.	0.975
PV05_05348	PV05_06559	A0A0D2D2S7	A0A0D2CVP7	Cwf21 domain-containing protein.	Uncharacterized protein.	0.981
PV05_05348	PV05_07899	A0A0D2D2S7	A0A0D2BIQ3	Cwf21 domain-containing protein.	Cir_N domain-containing protein.	0.983
PV05_05348	PV05_10068	A0A0D2D2S7	A0A0D2E9J7	Cwf21 domain-containing protein.	Uncharacterized protein.	0.984
PV05_06559	PV05_03213	A0A0D2CVP7	A0A0D2FF15	Uncharacterized protein.	Slu7 domain-containing protein.	0.939
PV05_06559	PV05_05348	A0A0D2CVP7	A0A0D2D2S7	Uncharacterized protein.	Cwf21 domain-containing protein.	0.981
PV05_06559	PV05_07899	A0A0D2CVP7	A0A0D2BIQ3	Uncharacterized protein.	Cir_N domain-containing protein.	0.993
PV05_06559	PV05_10068	A0A0D2CVP7	A0A0D2E9J7	Uncharacterized protein.	Uncharacterized protein.	0.996
PV05_07899	PV05_03213	A0A0D2BIQ3	A0A0D2FF15	Cir_N domain-containing protein.	Slu7 domain-containing protein.	0.944
PV05_07899	PV05_05348	A0A0D2BIQ3	A0A0D2D2S7	Cir_N domain-containing protein.	Cwf21 domain-containing protein.	0.983
PV05_07899	PV05_06559	A0A0D2BIQ3	A0A0D2CVP7	Cir_N domain-containing protein.	Uncharacterized protein.	0.993
PV05_07899	PV05_10068	A0A0D2BIQ3	A0A0D2E9J7	Cir_N domain-containing protein.	Uncharacterized protein.	0.996
PV05_10068	PV05_03213	A0A0D2E9J7	A0A0D2FF15	Uncharacterized protein.	Slu7 domain-containing protein.	0.998
PV05_10068	PV05_05348	A0A0D2E9J7	A0A0D2D2S7	Uncharacterized protein.	Cwf21 domain-containing protein.	0.984
PV05_10068	PV05_06559	A0A0D2E9J7	A0A0D2CVP7	Uncharacterized protein.	Uncharacterized protein.	0.996
PV05_10068	PV05_07899	A0A0D2E9J7	A0A0D2BIQ3	Uncharacterized protein.	Cir_N domain-containing protein.	0.996