STRINGSTRING
PV05_02064 PV05_02064 PV05_06435 PV05_06435 PV05_01001 PV05_01001 PV05_01666 PV05_01666 PV05_00650 PV05_00650 PV05_01264 PV05_01264 PV05_00315 PV05_00315 PV05_01146 PV05_01146 PV05_07996 PV05_07996 PV05_00134 PV05_00134 PV05_03730 PV05_03730 PV05_10094 PV05_10094 PV05_02014 PV05_02014 PV05_00236 PV05_00236 PV05_03702 PV05_03702 PV05_03388 PV05_03388 PV05_02272 PV05_02272 PV05_11821 PV05_11821 PV05_11431 PV05_11431 PV05_11362 PV05_11362 PV05_05862 PV05_05862 PV05_04464 PV05_04464 PV05_04995 PV05_04995 PV05_07460 PV05_07460 PV05_08200 PV05_08200 PV05_07980 PV05_07980 PV05_07864 PV05_07864 PV05_10068 PV05_10068 PV05_10434 PV05_10434 PV05_10231 PV05_10231 PV05_11344 PV05_11344 PV05_00433 PV05_00433 PV05_00138 PV05_00138 PV05_04054 PV05_04054 PV05_03630 PV05_03630 PV05_03545 PV05_03545 PV05_07899 PV05_07899 PV05_07742 PV05_07742 PV05_10241 PV05_10241 PV05_07071 PV05_07071 PV05_02130 PV05_02130 PV05_04993 PV05_04993 PV05_03933 PV05_03933 PV05_00741 PV05_00741 PV05_09535 PV05_09535 PV05_06559 PV05_06559 PV05_09189 PV05_09189 PV05_07909 PV05_07909 PV05_07756 PV05_07756 PV05_10381 PV05_10381 PV05_06006 PV05_06006 PV05_02769 PV05_02769 PV05_05676 PV05_05676
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV05_02064RRM domain-containing protein. (197 aa)
PV05_06435U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (183 aa)
PV05_01001Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (95 aa)
PV05_01666SF3b1 domain-containing protein. (1203 aa)
PV05_00650Small nuclear ribonucleoprotein Sm D2. (187 aa)
PV05_01264Pre-mRNA-splicing factor slt11. (374 aa)
PV05_00315MFAP1 domain-containing protein. (518 aa)
PV05_01146Pre-mRNA-splicing factor isy1. (253 aa)
PV05_07996U1-type domain-containing protein. (299 aa)
PV05_00134Uncharacterized protein. (480 aa)
PV05_03730Uncharacterized protein. (333 aa)
PV05_10094Tr-type G domain-containing protein. (982 aa)
PV05_02014Uncharacterized protein. (561 aa)
PV05_00236Pre-mRNA-splicing factor syf1. (854 aa)
PV05_03702Nuclear cap-binding protein subunit 2. (177 aa)
PV05_03388Branchpoint-bridging protein. (546 aa)
PV05_02272GH16 domain-containing protein. (365 aa)
PV05_11821Uncharacterized protein. (537 aa)
PV05_11431Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (130 aa)
PV05_11362Uncharacterized protein. (638 aa)
PV05_05862Uncharacterized protein. (396 aa)
PV05_04464C2H2-type domain-containing protein. (161 aa)
PV05_04995Uncharacterized protein. (478 aa)
PV05_07460Uncharacterized protein. (374 aa)
PV05_08200Matrin-type domain-containing protein. (235 aa)
PV05_07980Uncharacterized protein. (684 aa)
PV05_07864Pre-mRNA-processing ATP-dependent RNA helicase prp5. (1182 aa)
PV05_10068Uncharacterized protein. (990 aa)
PV05_10434Uncharacterized protein. (317 aa)
PV05_10231Uncharacterized protein. (208 aa)
PV05_11344Uncharacterized protein. (473 aa)
PV05_00433Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (763 aa)
PV05_00138RRM domain-containing protein. (412 aa)
PV05_04054Uncharacterized protein. (294 aa)
PV05_03630GH16 domain-containing protein. (403 aa)
PV05_03545G-patch domain-containing protein. (648 aa)
PV05_07899Cir_N domain-containing protein. (392 aa)
PV05_07742Uncharacterized protein. (764 aa)
PV05_10241Uncharacterized protein. (314 aa)
PV05_07071Sm domain-containing protein. (134 aa)
PV05_02130Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1410 aa)
PV05_04993Small nuclear ribonucleoprotein G. (69 aa)
PV05_03933RRM domain-containing protein. (116 aa)
PV05_00741Uncharacterized protein. (1685 aa)
PV05_09535Sm domain-containing protein. (225 aa)
PV05_06559Uncharacterized protein. (298 aa)
PV05_09189PSP domain-containing protein. (1125 aa)
PV05_07909Pre-mRNA-splicing factor clf1. (676 aa)
PV05_07756Uncharacterized protein. (371 aa)
PV05_10381Uncharacterized protein. (426 aa)
PV05_06006Uncharacterized protein. (336 aa)
PV05_02769Matrin-type domain-containing protein. (517 aa)
PV05_05676Uncharacterized protein. (935 aa)
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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