STRINGSTRING
PV05_04526 PV05_04526 TIF6 TIF6 PV05_05217 PV05_05217 PV05_05243 PV05_05243 PV05_05309 PV05_05309 PV05_05688 PV05_05688 PV05_05868 PV05_05868 PV05_02329 PV05_02329 PV05_02755 PV05_02755 PV05_03040 PV05_03040 PV05_03053 PV05_03053 PV05_03115 PV05_03115 PV05_03444 PV05_03444 PV05_03479 PV05_03479 PV05_04134 PV05_04134 PV05_00065 PV05_00065 PV05_00135 PV05_00135 PV05_00156 PV05_00156 PV05_00182 PV05_00182 PV05_00708 PV05_00708 PV05_00787 PV05_00787 PV05_00962 PV05_00962 PV05_01152 PV05_01152 PV05_01459 PV05_01459 YTM1 YTM1 PV05_01799 PV05_01799 NOP7 NOP7 PV05_02161 PV05_02161 PV05_11106 PV05_11106 PV05_11502 PV05_11502 PV05_11572 PV05_11572 ERB1 ERB1 PV05_11907 PV05_11907 PV05_11981 PV05_11981 PV05_09958 PV05_09958 PV05_10241 PV05_10241 PV05_10384 PV05_10384 PV05_10388 PV05_10388 PV05_10452 PV05_10452 PV05_07842 PV05_07842 PV05_08054 PV05_08054 PV05_08869 PV05_08869 PV05_08885 PV05_08885 PV05_09183 PV05_09183 PV05_06390 PV05_06390 PV05_06720 PV05_06720 PV05_06746 PV05_06746 PV05_06808 PV05_06808 PV05_07357 PV05_07357 PV05_07374 PV05_07374 PV05_04614 PV05_04614 PV05_04865 PV05_04865 PV05_05002 PV05_05002 PV05_05367 PV05_05367 PV05_05602 PV05_05602 PV05_05673 PV05_05673 PV05_05961 PV05_05961 PV05_02679 PV05_02679 PV05_02845 PV05_02845 PV05_02904 PV05_02904 PV05_03441 PV05_03441 PV05_03676 PV05_03676 PV05_04018 PV05_04018 PV05_00141 PV05_00141 PV05_00204 PV05_00204 PV05_00247 PV05_00247 PV05_00278 PV05_00278 PV05_00488 PV05_00488 PV05_00568 PV05_00568 PV05_00773 PV05_00773 PV05_00778 PV05_00778 PV05_00824 PV05_00824 PV05_00833 PV05_00833 PV05_00918 PV05_00918 PV05_01257 PV05_01257 PV05_01262 PV05_01262 PV05_01523 PV05_01523 PV05_01660 PV05_01660 PV05_01786 PV05_01786 PV05_01878 PV05_01878 PV05_01967 PV05_01967 PV05_02122 PV05_02122 PV05_10822 PV05_10822 PV05_11618 PV05_11618 PV05_11943 PV05_11943 PV05_11992 PV05_11992 PV05_09540 PV05_09540 PV05_10252 PV05_10252 PV05_10262 PV05_10262 PV05_08068 PV05_08068 PV05_08192 PV05_08192 PV05_08322 PV05_08322 PV05_08947 PV05_08947 PV05_09066 PV05_09066 PV05_06529 PV05_06529 PV05_06696 PV05_06696 PV05_06726 PV05_06726 PV05_07014 PV05_07014 PV05_07420 PV05_07420 PV05_07527 PV05_07527 PV05_07598 PV05_07598 PV05_04585 PV05_04585 PV05_05307 PV05_05307 PV05_05312 PV05_05312 PV05_05392 PV05_05392 PV05_05408 PV05_05408 PV05_05823 PV05_05823 PV05_05967 PV05_05967 PV05_02337 PV05_02337 PV05_02738 PV05_02738 PV05_03052 PV05_03052 PV05_03753 PV05_03753 PV05_03762 PV05_03762 PV05_04024 PV05_04024 PV05_04049 PV05_04049 PV05_00391 PV05_00391 PV05_00662 PV05_00662 PV05_00829 PV05_00829 PV05_01008 PV05_01008 PV05_01173 PV05_01173 PV05_01567 PV05_01567 LSM5 LSM5 PV05_10684 PV05_10684 PV05_11212 PV05_11212 PV05_11282 PV05_11282 PV05_11385 PV05_11385 PV05_11394 PV05_11394 PV05_09302 PV05_09302 PV05_11892 PV05_11892 PV05_09874 PV05_09874 FEN1 FEN1 PV05_09592 PV05_09592 PV05_09597 PV05_09597 PV05_10248 PV05_10248 PV05_10327 PV05_10327 PV05_09947 PV05_09947 PV05_09962 PV05_09962 PV05_10617 PV05_10617 PV05_10004 PV05_10004 PV05_10023 PV05_10023 PV05_08033 PV05_08033 PV05_10441 PV05_10441 PV05_08163 PV05_08163 PV05_08070 PV05_08070 PV05_08378 PV05_08378 PV05_09197 PV05_09197 PV05_06420 PV05_06420 PV05_06463 PV05_06463 PV05_08914 PV05_08914 PV05_06511 PV05_06511 PV05_09052 PV05_09052 PV05_06697 PV05_06697 PV05_09110 PV05_09110 PV05_09218 PV05_09218 PV05_06342 PV05_06342 PV05_06451 PV05_06451 PV05_06802 PV05_06802 PV05_07003 PV05_07003 PV05_07082 PV05_07082 PV05_07131 PV05_07131 PV05_04404 PV05_04404 PV05_04487 PV05_04487 PV05_04588 PV05_04588 PV05_07387 PV05_07387 PV05_05157 PV05_05157 PV05_10858 PV05_10858 PV05_10930 PV05_10930 PV05_10987 PV05_10987 PV05_11094 PV05_11094 PV05_05811 PV05_05811 PV05_05169 PV05_05169 PV05_05917 PV05_05917 PV05_11352 PV05_11352 PV05_11384 PV05_11384 PV05_05305 PV05_05305 PV05_05347 PV05_05347 PV05_02197 PV05_02197 PV05_02257 PV05_02257 PV05_11602 PV05_11602 PV05_05694 PV05_05694 PV05_02787 PV05_02787 PV05_11998 PV05_11998 PV05_03005 PV05_03005 PV05_09468 PV05_09468 PV05_09831 PV05_09831 PV05_09888 PV05_09888 PV05_03539 PV05_03539 PV05_09993 PV05_09993 PV05_02741 PV05_02741 NAT10 NAT10 PV05_02794 PV05_02794 PV05_03763 PV05_03763 LSM4 LSM4 PV05_02932 PV05_02932 PV05_03836 PV05_03836 PV05_10239 PV05_10239 PV05_03986 PV05_03986 PV05_04113 PV05_04113 SPB1 SPB1 PV05_03595 PV05_03595 PV05_00349 PV05_00349 PV05_00493 PV05_00493 PV05_07986 PV05_07986 PV05_07996 PV05_07996 PV05_00579 PV05_00579 PV05_08209 PV05_08209 PV05_08362 PV05_08362 PV05_04095 PV05_04095 PV05_01009 PV05_01009 PV05_01041 PV05_01041 PV05_08614 PV05_08614 PV05_08626 PV05_08626 PV05_00251 PV05_00251 PV05_00384 PV05_00384 PV05_00525 PV05_00525 PV05_08939 PV05_08939 PV05_09063 PV05_09063 PV05_00719 PV05_00719 PV05_09142 PV05_09142 PV05_01178 PV05_01178 PV05_06512 PV05_06512 PV05_01331 PV05_01331 PV05_01359 PV05_01359 PV05_01390 PV05_01390 PV05_06749 PV05_06749 PV05_06789 PV05_06789 PV05_01617 PV05_01617 PV05_01679 PV05_01679 PV05_07035 PV05_07035 PV05_01992 PV05_01992 PV05_02093 PV05_02093 PV05_02141 PV05_02141 PV05_07426 PV05_07426 PV05_07436 PV05_07436 PV05_04816 PV05_04816
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV05_0452618S rRNA biogenesis protein RCL1. (403 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (248 aa)
PV05_05217Ribosomal RNA small subunit methyltransferase NEP1. (258 aa)
PV05_05243Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (324 aa)
PV05_05309FCP1 homology domain-containing protein. (558 aa)
PV05_05688Uncharacterized protein. (1023 aa)
PV05_05868Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (512 aa)
PV05_02329Protein kinase domain-containing protein. (1068 aa)
PV05_02755Uncharacterized protein. (151 aa)
PV05_03040RNase_PH domain-containing protein. (374 aa)
PV05_03053Uncharacterized protein. (757 aa)
PV05_03115Uncharacterized protein. (932 aa)
PV05_03444Bms1-type G domain-containing protein. (820 aa)
PV05_03479Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (267 aa)
PV05_04134NUC153 domain-containing protein. (717 aa)
PV05_00065Uncharacterized protein. (656 aa)
PV05_00135Uncharacterized protein. (409 aa)
PV05_00156Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (250 aa)
PV05_00182NUC153 domain-containing protein. (752 aa)
PV05_00708RNA helicase. (849 aa)
PV05_00787Uncharacterized protein; Belongs to the DEAD box helicase family. (830 aa)
PV05_00962Methyltransf_11 domain-containing protein. (221 aa)
PV05_01152Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
PV05_01459RNA helicase. (641 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (460 aa)
PV05_01799zf-LYAR domain-containing protein. (530 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (674 aa)
PV05_02161Uncharacterized protein; Belongs to the RNR ribonuclease family. (1006 aa)
PV05_11106Uncharacterized protein; Belongs to the DEAD box helicase family. (731 aa)
PV05_11502Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4841 aa)
PV05_11572Transket_pyr domain-containing protein. (390 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (781 aa)
PV05_11907Uncharacterized protein. (478 aa)
PV05_11981Uncharacterized protein; Belongs to the DEAD box helicase family. (796 aa)
PV05_09958WD_REPEATS_REGION domain-containing protein. (950 aa)
PV05_10241Uncharacterized protein. (314 aa)
PV05_10384tRNA dimethylallyltransferase. (431 aa)
PV05_10388RNase_PH domain-containing protein. (363 aa)
PV05_10452Centromere/microtubule-binding protein cbf5. (507 aa)
PV05_07842Uncharacterized protein. (292 aa)
PV05_08054U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (722 aa)
PV05_08869Uncharacterized protein. (383 aa)
PV05_08885WD_REPEATS_REGION domain-containing protein. (509 aa)
PV05_09183RNase III domain-containing protein. (301 aa)
PV05_06390Elp3 domain-containing protein. (360 aa)
PV05_06720Uncharacterized protein. (202 aa)
PV05_06746Uncharacterized protein. (767 aa)
PV05_06808Uncharacterized protein. (390 aa)
PV05_07357Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (396 aa)
PV05_07374Hist_deacetyl domain-containing protein. (359 aa)
PV05_04614Csm1 domain-containing protein. (505 aa)
PV05_04865Uncharacterized protein. (365 aa)
PV05_05002WD_REPEATS_REGION domain-containing protein. (964 aa)
PV05_05367Uncharacterized protein. (293 aa)
PV05_05602Uncharacterized protein. (518 aa)
PV05_05673AB hydrolase-1 domain-containing protein. (419 aa)
PV05_05961RPOLD domain-containing protein. (376 aa)
PV05_02679Uncharacterized protein. (385 aa)
PV05_02845CBF domain-containing protein. (288 aa)
PV05_02904Urb2 domain-containing protein. (1485 aa)
PV05_03441Utp12 domain-containing protein. (886 aa)
PV05_03676rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (392 aa)
PV05_04018DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (130 aa)
PV05_00141Uncharacterized protein. (205 aa)
PV05_00204Uncharacterized protein. (800 aa)
PV05_00247Uncharacterized protein. (1803 aa)
PV05_00278ATP-dependent RNA helicase DBP10. (920 aa)
PV05_00488Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (202 aa)
PV05_00568SRP9-21 domain-containing protein. (182 aa)
PV05_00773Ribonuclease P protein subunit. (282 aa)
PV05_00778DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
PV05_00824Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (437 aa)
PV05_00833CBF domain-containing protein. (1041 aa)
PV05_00918RRM domain-containing protein. (692 aa)
PV05_01257Uncharacterized protein. (534 aa)
PV05_01262J domain-containing protein. (539 aa)
PV05_01523S1 motif domain-containing protein. (353 aa)
PV05_01660CLP1_P domain-containing protein. (627 aa)
PV05_01786Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (124 aa)
PV05_01878G-patch domain-containing protein. (305 aa)
PV05_01967Uncharacterized protein. (271 aa)
PV05_02122Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (577 aa)
PV05_10822Uncharacterized protein. (521 aa)
PV05_11618Uncharacterized protein. (332 aa)
PV05_11943Uncharacterized protein. (299 aa)
PV05_11992Uncharacterized protein. (276 aa)
PV05_09540SWIB domain-containing protein. (271 aa)
PV05_1025225S rRNA adenine-N(1) methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of an adenine present in helix 65 in 25S rRNA; Belongs to the BMT2 family. (392 aa)
PV05_10262DUF2431 domain-containing protein. (371 aa)
PV05_08068Uncharacterized protein. (489 aa)
PV05_08192Uncharacterized protein. (76 aa)
PV05_08322CPL domain-containing protein. (706 aa)
PV05_08947ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (482 aa)
PV05_09066Nucleolar protein 58. (637 aa)
PV05_06529Uncharacterized protein. (305 aa)
PV05_06696Uncharacterized protein. (356 aa)
PV05_06726Uncharacterized protein. (630 aa)
PV05_07014SGL domain-containing protein. (416 aa)
PV05_07420SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (529 aa)
PV05_07527Uncharacterized protein. (297 aa)
PV05_07598RNase_PH domain-containing protein. (258 aa)
PV05_04585Uncharacterized protein. (778 aa)
PV05_05307Uncharacterized protein. (307 aa)
PV05_05312Uncharacterized protein. (185 aa)
PV05_05392Brix domain-containing protein. (384 aa)
PV05_05408Uncharacterized protein. (152 aa)
PV05_05823Protein MAK16; Belongs to the MAK16 family. (322 aa)
PV05_05967rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family. (125 aa)
PV05_02337WD_REPEATS_REGION domain-containing protein. (889 aa)
PV05_02738Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (638 aa)
PV05_03052Stc1 domain-containing protein. (284 aa)
PV05_03753Uncharacterized protein. (279 aa)
PV05_03762Uncharacterized protein. (609 aa)
PV05_04024DRIM domain-containing protein. (2597 aa)
PV05_04049Uncharacterized protein. (538 aa)
PV05_00391Uncharacterized protein. (1188 aa)
PV05_00662RRM domain-containing protein. (312 aa)
PV05_00829Uncharacterized protein. (694 aa)
PV05_01008Uncharacterized protein. (306 aa)
PV05_01173Nop domain-containing protein. (516 aa)
PV05_01567HRDC domain-containing protein. (820 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (123 aa)
PV05_10684Uncharacterized protein; Belongs to the DEAD box helicase family. (528 aa)
PV05_11212Uncharacterized protein; Belongs to the DEAD box helicase family. (513 aa)
PV05_11282Bms1-type G domain-containing protein. (1177 aa)
PV05_11385Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (682 aa)
PV05_11394Uncharacterized protein. (915 aa)
PV05_09302WD_REPEATS_REGION domain-containing protein. (533 aa)
PV05_11892Uncharacterized protein. (1034 aa)
PV05_09874WD_REPEATS_REGION domain-containing protein. (969 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (412 aa)
PV05_09592DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (902 aa)
PV05_09597S4 RNA-binding domain-containing protein. (188 aa)
PV05_10248U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (738 aa)
PV05_10327Uncharacterized protein. (494 aa)
PV05_09947U6 snRNA-associated Sm-like protein LSm6. (104 aa)
PV05_09962Uncharacterized protein. (589 aa)
PV05_10617Uncharacterized protein. (1088 aa)
PV05_10004PINc domain-containing protein. (194 aa)
PV05_10023Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (229 aa)
PV05_08033Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (279 aa)
PV05_10441Uncharacterized protein. (1238 aa)
PV05_08163TRASH domain-containing protein. (196 aa)
PV05_08070Kri1_C domain-containing protein. (598 aa)
PV05_08378Uncharacterized protein. (1073 aa)
PV05_09197U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (280 aa)
PV05_06420Uncharacterized protein. (573 aa)
PV05_06463MI domain-containing protein. (859 aa)
PV05_08914RNA helicase. (632 aa)
PV05_06511Brix domain-containing protein. (296 aa)
PV05_09052RRM domain-containing protein. (722 aa)
PV05_06697Brix domain-containing protein. (340 aa)
PV05_09110DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1741 aa)
PV05_09218Sas10 domain-containing protein. (592 aa)
PV05_06342CP-type G domain-containing protein. (548 aa)
PV05_06451Uncharacterized protein. (523 aa)
PV05_06802H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (210 aa)
PV05_07003Uncharacterized protein. (683 aa)
PV05_07082WD_REPEATS_REGION domain-containing protein. (983 aa)
PV05_07131Uncharacterized protein. (707 aa)
PV05_04404Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (756 aa)
PV05_04487Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
PV05_04588Uncharacterized protein. (417 aa)
PV05_07387BP28CT domain-containing protein. (1828 aa)
PV05_0515740S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
PV05_10858Uncharacterized protein. (295 aa)
PV05_10930RRM domain-containing protein. (290 aa)
PV05_10987Uncharacterized protein. (229 aa)
PV05_11094Uncharacterized protein. (567 aa)
PV05_05811Fcf2 domain-containing protein. (225 aa)
PV05_05169U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
PV05_05917Brix domain-containing protein. (440 aa)
PV05_11352DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1211 aa)
PV05_1138460S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
PV05_05305RNA_pol_L_2 domain-containing protein. (127 aa)
PV05_05347Checkpoint protein; Belongs to the HUS1 family. (354 aa)
PV05_02197Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (702 aa)
PV05_0225720S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (439 aa)
PV05_11602Uncharacterized protein. (1317 aa)
PV05_05694Uncharacterized protein. (900 aa)
PV05_02787TYR_PHOSPHATASE_2 domain-containing protein. (653 aa)
PV05_11998Methyltransf_25 domain-containing protein. (242 aa)
PV05_03005Uncharacterized protein. (217 aa)
PV05_09468Uncharacterized protein. (493 aa)
PV05_09831Uncharacterized protein. (498 aa)
PV05_09888Uncharacterized protein. (445 aa)
PV05_03539WD_REPEATS_REGION domain-containing protein. (555 aa)
PV05_09993WD_REPEATS_REGION domain-containing protein. (526 aa)
PV05_02741ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family. (404 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1126 aa)
PV05_02794RNase_PH domain-containing protein. (267 aa)
PV05_03763WD_REPEATS_REGION domain-containing protein. (592 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (125 aa)
PV05_02932SRP40_C domain-containing protein. (401 aa)
PV05_03836Ribosome biogenesis protein NSA2. (261 aa)
PV05_10239Uncharacterized protein. (164 aa)
PV05_03986DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1176 aa)
PV05_04113Uncharacterized protein. (149 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (833 aa)
PV05_03595Fe2OG dioxygenase domain-containing protein. (162 aa)
PV05_00349Uncharacterized protein. (296 aa)
PV05_00493RNase_PH domain-containing protein. (309 aa)
PV05_07986Uncharacterized protein. (1005 aa)
PV05_07996U1-type domain-containing protein. (299 aa)
PV05_00579Uncharacterized protein. (379 aa)
PV05_08209KH_dom_type_1 domain-containing protein. (245 aa)
PV05_08362Uncharacterized protein. (763 aa)
PV05_04095Uncharacterized protein. (291 aa)
PV05_01009Uncharacterized protein. (684 aa)
PV05_01041WD_REPEATS_REGION domain-containing protein. (508 aa)
PV05_08614CutC domain-containing protein. (223 aa)
PV05_08626SGL domain-containing protein. (421 aa)
PV05_00251DNA ligase. (1028 aa)
PV05_00384Sm domain-containing protein. (108 aa)
PV05_00525Sec2p domain-containing protein. (281 aa)
PV05_08939Brix domain-containing protein. (447 aa)
PV05_09063Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (439 aa)
PV05_00719Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (836 aa)
PV05_09142Uncharacterized protein. (238 aa)
PV05_01178KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (357 aa)
PV05_06512BRCT domain-containing protein. (537 aa)
PV05_01331U3 small nucleolar RNA-associated protein 22. (1133 aa)
PV05_01359Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1234 aa)
PV05_01390HMG box domain-containing protein. (297 aa)
PV05_06749rRNA 2'-O-methyltransferase fibrillarin. (322 aa)
PV05_06789Uncharacterized protein. (369 aa)
PV05_01617Uncharacterized protein. (291 aa)
PV05_01679Uncharacterized protein. (697 aa)
PV05_07035RPA43_OB domain-containing protein. (432 aa)
PV05_01992Pre-rRNA-processing protein PNO1. (263 aa)
PV05_02093Uncharacterized protein. (560 aa)
PV05_02141Uncharacterized protein. (224 aa)
PV05_07426Uncharacterized protein. (824 aa)
PV05_07436Uncharacterized protein. (1446 aa)
PV05_04816RRM domain-containing protein. (492 aa)
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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