68 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_02365	Ribosomal protein L1. (306 aa)
	PV05_11008	Ribosomal_S7 domain-containing protein. (351 aa)
	PV05_10599	Ribosomal protein S16. (135 aa)
	PV05_07917	Ribosomal_L2_C domain-containing protein. (404 aa)
	PV05_08076	50S ribosomal protein L3. (315 aa)
	PV05_04382	Uncharacterized protein. (256 aa)
	PV05_05790	37S ribosomal protein S25, mitochondrial. (278 aa)
	PV05_05971	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (311 aa)
	PV05_00092	Ribosomal protein L15; Belongs to the universal ribosomal protein uL15 family. (316 aa)
	PV05_00661	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (521 aa)
	PV05_10826	Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family. (255 aa)
	PV05_11077	L51_S25_CI-B8 domain-containing protein. (222 aa)
	PV05_11141	Ribosomal protein L7/L12. (199 aa)
	PV05_11326	Uncharacterized protein. (307 aa)
	PV05_09699	Uncharacterized protein. (324 aa)
	PV05_09829	Uncharacterized protein. (229 aa)
	PV05_10267	Ribosomal_L5_C domain-containing protein. (353 aa)
	PV05_09026	Ribosomal protein S15. (316 aa)
	PV05_06809	RF_PROK_I domain-containing protein. (192 aa)
	PV05_04935	Uncharacterized protein. (111 aa)
	PV05_02506	RNase III domain-containing protein. (282 aa)
	PV05_02733	SET domain-containing protein. (725 aa)
	PV05_02819	Uncharacterized protein. (390 aa)
	PV05_03123	Uncharacterized protein. (150 aa)
	PV05_03501	Uncharacterized protein. (142 aa)
	PV05_04014	MRP-L46 domain-containing protein. (376 aa)
	PV05_00054	Ribosomal protein S6. (143 aa)
	PV05_12015	S4 RNA-binding domain-containing protein. (434 aa)
	PV05_09299	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (369 aa)
	PV05_09440	Uncharacterized protein. (170 aa)
	PV05_10110	Uncharacterized protein. (184 aa)
	PV05_09543	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (491 aa)
	PV05_09572	Uncharacterized protein. (368 aa)
	PV05_10226	Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (227 aa)
	PV05_08327	Ribosomal protein L32. (134 aa)
	PV05_08281	Uncharacterized protein. (384 aa)
	PV05_08358	Uncharacterized protein. (248 aa)
	PV05_09185	Uncharacterized protein. (109 aa)
	PV05_06430	MRP-S28 domain-containing protein. (390 aa)
	PV05_06469	Ribosomal protein S2. (422 aa)
	PV05_04445	Uncharacterized protein. (220 aa)
	PV05_02234	Ribosomal protein L27. (269 aa)
	PV05_11715	Uncharacterized protein. (113 aa)
	PV05_11980	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated. (429 aa)
	PV05_02866	Uncharacterized protein. (253 aa)
	PV05_05991	Uncharacterized protein. (410 aa)
	PV05_10022	Uncharacterized protein. (488 aa)
	PV05_02875	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (269 aa)
	PV05_00109	50S ribosomal protein L4. (318 aa)
	PV05_00420	Uncharacterized protein. (326 aa)
	PV05_04017	Ribosomal protein L14; Belongs to the universal ribosomal protein uL14 family. (134 aa)
	PV05_00951	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (403 aa)
	PV05_00136	L51_S25_CI-B8 domain-containing protein. (139 aa)
	PV05_00445	Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. (153 aa)
	PV05_09004	Uncharacterized protein. (197 aa)
	PV05_01673	Uncharacterized protein. (190 aa)
	PV05_00943	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (94 aa)
	PV05_02013	Mitoc_mL59 domain-containing protein. (211 aa)
	PV05_07148	Ribosomal protein L19. (235 aa)
	PV05_02149	30S ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family. (118 aa)
	PV05_05668	Ribosomal protein L13. (167 aa)
	PV05_02253	Uncharacterized protein. (293 aa)
	PV05_02857	Uncharacterized protein. (303 aa)
	PV05_03656	Ribosomal protein S18. (170 aa)
	PV05_00173	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (174 aa)
	PV05_00343	Uncharacterized protein. (416 aa)
	PV05_00596	Uncharacterized protein. (599 aa)
	PV05_01335	Uncharacterized protein. (202 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_00054	PV05_00092	A0A0D2DBV4	A0A0D2C4K8	Ribosomal protein S6.	Ribosomal protein L15; Belongs to the universal ribosomal protein uL15 family.	0.997
PV05_00054	PV05_00109	A0A0D2DBV4	A0A0D2EVU3	Ribosomal protein S6.	50S ribosomal protein L4.	0.995
PV05_00054	PV05_00136	A0A0D2DBV4	A0A0D2EYW9	Ribosomal protein S6.	L51_S25_CI-B8 domain-containing protein.	0.980
PV05_00054	PV05_00173	A0A0D2DBV4	A0A0D2FID9	Ribosomal protein S6.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.999
PV05_00054	PV05_00343	A0A0D2DBV4	A0A0D2FIX3	Ribosomal protein S6.	Uncharacterized protein.	0.679
PV05_00054	PV05_00420	A0A0D2DBV4	A0A0D2EWR5	Ribosomal protein S6.	Uncharacterized protein.	0.985
PV05_00054	PV05_00445	A0A0D2DBV4	A0A0D2EZU0	Ribosomal protein S6.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	0.995
PV05_00054	PV05_00596	A0A0D2DBV4	A0A0D2FJR2	Ribosomal protein S6.	Uncharacterized protein.	0.637
PV05_00054	PV05_00661	A0A0D2DBV4	A0A0D2C6C7	Ribosomal protein S6.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.923
PV05_00054	PV05_00943	A0A0D2DBV4	A0A0D2F1B7	Ribosomal protein S6.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.927
PV05_00054	PV05_00951	A0A0D2DBV4	A0A0D2EYE3	Ribosomal protein S6.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
PV05_00054	PV05_01335	A0A0D2DBV4	A0A0D2FM08	Ribosomal protein S6.	Uncharacterized protein.	0.928
PV05_00054	PV05_01673	A0A0D2DBV4	A0A0D2F0Z2	Ribosomal protein S6.	Uncharacterized protein.	0.952
PV05_00054	PV05_02013	A0A0D2DBV4	A0A0D2F1Y6	Ribosomal protein S6.	Mitoc_mL59 domain-containing protein.	0.664
PV05_00054	PV05_02149	A0A0D2DBV4	A0A0D2F550	Ribosomal protein S6.	30S ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	0.990
PV05_00054	PV05_02234	A0A0D2DBV4	A0A0D2EPY8	Ribosomal protein S6.	Ribosomal protein L27.	0.989
PV05_00054	PV05_02253	A0A0D2DBV4	A0A0D2FC83	Ribosomal protein S6.	Uncharacterized protein.	0.989
PV05_00054	PV05_02819	A0A0D2DBV4	A0A0D2D7J1	Ribosomal protein S6.	Uncharacterized protein.	0.958
PV05_00054	PV05_02857	A0A0D2DBV4	A0A0D2FE39	Ribosomal protein S6.	Uncharacterized protein.	0.736
PV05_00054	PV05_02866	A0A0D2DBV4	A0A0D2ERH6	Ribosomal protein S6.	Uncharacterized protein.	0.866