37 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_03160	Uncharacterized protein. (709 aa)
	PV05_10027	Uncharacterized protein. (1238 aa)
	PV05_10903	Uncharacterized protein. (547 aa)
	PV05_05488	Uncharacterized protein. (965 aa)
	PV05_05539	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (356 aa)
	PV05_02474	ACB domain-containing protein. (369 aa)
	PV05_02628	Zn(2)-C6 fungal-type domain-containing protein. (680 aa)
	PV05_01020	PlsC domain-containing protein. (781 aa)
	PV05_03931	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (467 aa)
	PV05_05440	TPR_REGION domain-containing protein. (618 aa)
	PV05_05332	Uncharacterized protein. (532 aa)
	PV05_05153	Uncharacterized protein. (1464 aa)
	PV05_00860	Pex2_Pex12 domain-containing protein. (465 aa)
	PV05_04120	PNPLA domain-containing protein. (381 aa)
	PV05_04010	Uncharacterized protein. (672 aa)
	PV05_10041	SH3 domain-containing protein. (496 aa)
	PV05_04639	Uncharacterized protein. (602 aa)
	PV05_04252	Uncharacterized protein. (1105 aa)
	PV05_06940	Uncharacterized protein. (829 aa)
	PV05_06461	Uncharacterized protein. (765 aa)
	PV05_08598	Pex14_N domain-containing protein. (389 aa)
	PV05_08306	Zn(2)-C6 fungal-type domain-containing protein. (783 aa)
	PV05_10137	Uncharacterized protein. (563 aa)
	PV05_06709	Peroxisomal membrane protein PEX16. (442 aa)
	PV05_05391	Uncharacterized protein. (226 aa)
	PV05_01425	Pex2_Pex12 domain-containing protein. (457 aa)
	PV05_06972	Uncharacterized protein. (986 aa)
	PV05_08271	Uncharacterized protein. (381 aa)
	PV05_02763	Pex24p domain-containing protein. (578 aa)
	PV05_00437	Uncharacterized protein. (310 aa)
	PV05_11105	PNPLA domain-containing protein. (397 aa)
	PV05_04615	AAA domain-containing protein; Belongs to the AAA ATPase family. (408 aa)
	PV05_04695	PNPLA domain-containing protein. (1294 aa)
	PV05_09926	PNPLA domain-containing protein. (521 aa)
	PV05_08651	PNPLA domain-containing protein. (576 aa)
	PV05_10648	RING-type domain-containing protein. (373 aa)
	PV05_11391	Uncharacterized protein. (238 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV05_00437	PV05_00860	A0A0D2DD14	A0A0D2F141	Uncharacterized protein.	Pex2_Pex12 domain-containing protein.	0.861
PV05_00437	PV05_02474	A0A0D2DD14	A0A0D2EQF6	Uncharacterized protein.	ACB domain-containing protein.	0.627
PV05_00437	PV05_02628	A0A0D2DD14	A0A0D2EQW7	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.669
PV05_00437	PV05_03160	A0A0D2DD14	A0A0D2EV66	Uncharacterized protein.	Uncharacterized protein.	0.717
PV05_00437	PV05_03931	A0A0D2DD14	A0A0D2FH76	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.669
PV05_00437	PV05_04615	A0A0D2DD14	A0A0D2D0K2	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.675
PV05_00437	PV05_05153	A0A0D2DD14	A0A0D2F916	Uncharacterized protein.	Uncharacterized protein.	0.723
PV05_00437	PV05_05332	A0A0D2DD14	A0A0D2F9J4	Uncharacterized protein.	Uncharacterized protein.	0.849
PV05_00437	PV05_05391	A0A0D2DD14	A0A0D2BWA4	Uncharacterized protein.	Uncharacterized protein.	0.737
PV05_00437	PV05_05440	A0A0D2DD14	A0A0D2F9X0	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.493
PV05_00437	PV05_05539	A0A0D2DD14	A0A0D2EQB7	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.669
PV05_00437	PV05_06709	A0A0D2DD14	A0A0D2EI81	Uncharacterized protein.	Peroxisomal membrane protein PEX16.	0.793
PV05_00437	PV05_06940	A0A0D2DD14	A0A0D2BPX9	Uncharacterized protein.	Uncharacterized protein.	0.717
PV05_00437	PV05_08271	A0A0D2DD14	A0A0D2ED90	Uncharacterized protein.	Uncharacterized protein.	0.964
PV05_00437	PV05_08598	A0A0D2DD14	A0A0D2BKI4	Uncharacterized protein.	Pex14_N domain-containing protein.	0.911
PV05_00437	PV05_10027	A0A0D2DD14	A0A0D2E9D9	Uncharacterized protein.	Uncharacterized protein.	0.693
PV05_00437	PV05_10041	A0A0D2DD14	A0A0D2EU09	Uncharacterized protein.	SH3 domain-containing protein.	0.911
PV05_00437	PV05_10648	A0A0D2DD14	A0A0D2E9D0	Uncharacterized protein.	RING-type domain-containing protein.	0.521
PV05_00860	PV05_00437	A0A0D2F141	A0A0D2DD14	Pex2_Pex12 domain-containing protein.	Uncharacterized protein.	0.861
PV05_00860	PV05_01020	A0A0D2F141	A0A0D2FL09	Pex2_Pex12 domain-containing protein.	PlsC domain-containing protein.	0.704