STRINGSTRING
PV05_01173 PV05_01173 PV05_01008 PV05_01008 PV05_04112 PV05_04112 PV05_04024 PV05_04024 PV05_02337 PV05_02337 PV05_05823 PV05_05823 PV05_07527 PV05_07527 PV05_06696 PV05_06696 PV05_09066 PV05_09066 PV05_08947 PV05_08947 PV05_08322 PV05_08322 PV05_02122 PV05_02122 PV05_01786 PV05_01786 PV05_00247 PV05_00247 PV05_03676 PV05_03676 PV05_02845 PV05_02845 PV05_02679 PV05_02679 PV05_05602 PV05_05602 PV05_05002 PV05_05002 PV05_06808 PV05_06808 PV05_06746 PV05_06746 PV05_08885 PV05_08885 PV05_08869 PV05_08869 PV05_08054 PV05_08054 PV05_09958 PV05_09958 PV05_11981 PV05_11981 ERB1 ERB1 PV05_11502 PV05_11502 PV05_07775 PV05_07775 PV05_08033 PV05_08033 PV05_11385 PV05_11385 NOP7 NOP7 YTM1 YTM1 PV05_01152 PV05_01152 PV05_00708 PV05_00708 PV05_00504 PV05_00504 PV05_00310 PV05_00310 PV05_04134 PV05_04134 PV05_03444 PV05_03444 PV05_03115 PV05_03115 PV05_05688 PV05_05688 PV05_04526 PV05_04526 PV05_06789 PV05_06789 PV05_06749 PV05_06749 PV05_01390 PV05_01390 PV05_01331 PV05_01331 PV05_01178 PV05_01178 PV05_09063 PV05_09063 PV05_01512 PV05_01512 PV05_08939 PV05_08939 PV05_00311 PV05_00311 PV05_08362 PV05_08362 PV05_00579 PV05_00579 SPB1 SPB1 PV05_10277 PV05_10277 PV05_03836 PV05_03836 PV05_03763 PV05_03763 NAT10 NAT10 PV05_03539 PV05_03539 PV05_11828 PV05_11828 PV05_05694 PV05_05694 PV05_02257 PV05_02257 PV05_11384 PV05_11384 PV05_05917 PV05_05917 PV05_04487 PV05_04487 PV05_07131 PV05_07131 PV05_07082 PV05_07082 PV05_06342 PV05_06342 PV05_09218 PV05_09218 PV05_06697 PV05_06697 PV05_06511 PV05_06511 PV05_06186 PV05_06186 PV05_09197 PV05_09197 PV05_08070 PV05_08070 PV05_09302 PV05_09302 PV05_09312 PV05_09312 PV05_09874 PV05_09874 PV05_09597 PV05_09597 PV05_09962 PV05_09962 PV05_10441 PV05_10441 PV05_10004 PV05_10004 PV05_10023 PV05_10023 PV05_11282 PV05_11282 PV05_10882 PV05_10882 PV05_01774 PV05_01774
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV05_01173Nop domain-containing protein. (516 aa)
PV05_01008Uncharacterized protein. (306 aa)
PV05_04112BUD22 domain-containing protein. (431 aa)
PV05_04024DRIM domain-containing protein. (2597 aa)
PV05_02337WD_REPEATS_REGION domain-containing protein. (889 aa)
PV05_05823Protein MAK16; Belongs to the MAK16 family. (322 aa)
PV05_07527Uncharacterized protein. (297 aa)
PV05_06696Uncharacterized protein. (356 aa)
PV05_09066Nucleolar protein 58. (637 aa)
PV05_08947ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (482 aa)
PV05_08322CPL domain-containing protein. (706 aa)
PV05_02122Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (577 aa)
PV05_01786Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (124 aa)
PV05_00247Uncharacterized protein. (1803 aa)
PV05_03676rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (392 aa)
PV05_02845CBF domain-containing protein. (288 aa)
PV05_02679Uncharacterized protein. (385 aa)
PV05_05602Uncharacterized protein. (518 aa)
PV05_05002WD_REPEATS_REGION domain-containing protein. (964 aa)
PV05_06808Uncharacterized protein. (390 aa)
PV05_06746Uncharacterized protein. (767 aa)
PV05_08885WD_REPEATS_REGION domain-containing protein. (509 aa)
PV05_08869Uncharacterized protein. (383 aa)
PV05_08054U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (722 aa)
PV05_09958WD_REPEATS_REGION domain-containing protein. (950 aa)
PV05_11981Uncharacterized protein; Belongs to the DEAD box helicase family. (796 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (781 aa)
PV05_11502Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4841 aa)
PV05_07775Uncharacterized protein. (264 aa)
PV05_08033Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (279 aa)
PV05_11385Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (682 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (674 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (460 aa)
PV05_01152Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
PV05_00708RNA helicase. (849 aa)
PV05_00504RIO domain-containing protein. (380 aa)
PV05_00310Uncharacterized protein. (355 aa)
PV05_04134NUC153 domain-containing protein. (717 aa)
PV05_03444Bms1-type G domain-containing protein. (820 aa)
PV05_03115Uncharacterized protein. (932 aa)
PV05_05688Uncharacterized protein. (1023 aa)
PV05_0452618S rRNA biogenesis protein RCL1. (403 aa)
PV05_06789Uncharacterized protein. (369 aa)
PV05_06749rRNA 2'-O-methyltransferase fibrillarin. (322 aa)
PV05_01390HMG box domain-containing protein. (297 aa)
PV05_01331U3 small nucleolar RNA-associated protein 22. (1133 aa)
PV05_01178KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (357 aa)
PV05_09063Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (439 aa)
PV05_01512C2H2-type domain-containing protein. (116 aa)
PV05_08939Brix domain-containing protein. (447 aa)
PV05_00311Uncharacterized protein. (270 aa)
PV05_08362Uncharacterized protein. (763 aa)
PV05_00579Uncharacterized protein. (379 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (833 aa)
PV05_10277Uncharacterized protein. (472 aa)
PV05_03836Ribosome biogenesis protein NSA2. (261 aa)
PV05_03763WD_REPEATS_REGION domain-containing protein. (592 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1126 aa)
PV05_03539WD_REPEATS_REGION domain-containing protein. (555 aa)
PV05_1182840S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
PV05_05694Uncharacterized protein. (900 aa)
PV05_0225720S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (439 aa)
PV05_1138460S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
PV05_05917Brix domain-containing protein. (440 aa)
PV05_04487Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
PV05_07131Uncharacterized protein. (707 aa)
PV05_07082WD_REPEATS_REGION domain-containing protein. (983 aa)
PV05_06342CP-type G domain-containing protein. (548 aa)
PV05_09218Sas10 domain-containing protein. (592 aa)
PV05_06697Brix domain-containing protein. (340 aa)
PV05_06511Brix domain-containing protein. (296 aa)
PV05_06186Uncharacterized protein. (284 aa)
PV05_09197U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (280 aa)
PV05_08070Kri1_C domain-containing protein. (598 aa)
PV05_09302WD_REPEATS_REGION domain-containing protein. (533 aa)
PV05_09312HAD_SAK_1 domain-containing protein. (569 aa)
PV05_09874WD_REPEATS_REGION domain-containing protein. (969 aa)
PV05_09597S4 RNA-binding domain-containing protein. (188 aa)
PV05_09962Uncharacterized protein. (589 aa)
PV05_10441Uncharacterized protein. (1238 aa)
PV05_10004PINc domain-containing protein. (194 aa)
PV05_10023Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (229 aa)
PV05_11282Bms1-type G domain-containing protein. (1177 aa)
PV05_1088240S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (260 aa)
PV05_0177440S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (261 aa)
Your Current Organism:
Exophiala xenobiotica
NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica
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