64 items (Exophiala xenobiotica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV05_05312	Uncharacterized protein. (185 aa)
	PV05_10979	KOW domain-containing protein. (148 aa)
	PV05_11502	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4841 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (781 aa)
	PV05_11981	Uncharacterized protein; Belongs to the DEAD box helicase family. (796 aa)
	PV05_07913	Translation initiation factor RLI1. (604 aa)
	PV05_08411	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
	PV05_06771	Uncharacterized protein. (190 aa)
	PV05_04739	60S ribosomal protein L7. (253 aa)
	PV05_02679	Uncharacterized protein. (385 aa)
	PV05_00247	Uncharacterized protein. (1803 aa)
	PV05_00824	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (437 aa)
	PV05_01318	Uncharacterized protein. (549 aa)
	PV05_11043	60S ribosomal protein L8-B. (341 aa)
	PV05_08172	Uncharacterized protein. (729 aa)
	PV05_08322	CPL domain-containing protein. (706 aa)
	PV05_06696	Uncharacterized protein. (356 aa)
	PV05_05220	Uncharacterized protein. (718 aa)
	PV05_05392	Brix domain-containing protein. (384 aa)
	PV05_05823	Protein MAK16; Belongs to the MAK16 family. (322 aa)
	PV05_02652	60S ribosomal protein L5. (300 aa)
	PV05_02984	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
	PV05_03762	Uncharacterized protein. (609 aa)
	PV05_00391	Uncharacterized protein. (1188 aa)
	PV05_00750	Ribosomal protein L24. (134 aa)
	PV05_00847	Exonuclease domain-containing protein. (311 aa)
	PV05_11473	60S ribosomal protein L10-A. (223 aa)
	PV05_10023	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (229 aa)
	PV05_10278	CP-type G domain-containing protein. (679 aa)
	PV05_08163	TRASH domain-containing protein. (196 aa)
	PV05_06186	Uncharacterized protein. (284 aa)
	PV05_09052	RRM domain-containing protein. (722 aa)
	PV05_06697	Brix domain-containing protein. (340 aa)
	PV05_06342	CP-type G domain-containing protein. (548 aa)
	PV05_06451	Uncharacterized protein. (523 aa)
	PV05_07131	Uncharacterized protein. (707 aa)
	PV05_04404	Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (756 aa)
	PV05_04487	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
	PV05_05917	Brix domain-containing protein. (440 aa)
	PV05_11384	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
	PV05_02197	Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (702 aa)
	PV05_09888	Uncharacterized protein. (445 aa)
	PV05_09993	WD_REPEATS_REGION domain-containing protein. (526 aa)
	PV05_03836	Ribosome biogenesis protein NSA2. (261 aa)
	PV05_10259	Ribosomal_L23eN domain-containing protein. (156 aa)
	PV05_10354	Uncharacterized protein. (473 aa)
	PV05_10383	RAI1 domain-containing protein. (394 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (833 aa)
	PV05_00579	Uncharacterized protein. (379 aa)
	PV05_08362	Uncharacterized protein. (763 aa)
	PV05_08400	60S ribosomal protein L35. (128 aa)
	PV05_01036	HIT-type domain-containing protein. (391 aa)
	PV05_00311	Uncharacterized protein. (270 aa)
	PV05_08939	Brix domain-containing protein. (447 aa)
	PV05_01818	Uncharacterized protein. (155 aa)
	TIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (248 aa)
	PV05_04939	60S ribosomal protein L33-A. (109 aa)
	PV05_05235	Uncharacterized protein. (387 aa)
	PV05_03479	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (267 aa)
	PV05_03513	60S ribosomal protein L10-A. (223 aa)
	PV05_00156	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (250 aa)
	PV05_00310	Uncharacterized protein. (355 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (460 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (674 aa)

Your Current Organism:

Exophiala xenobiotica

NCBI taxonomy Id: 348802
Other names: CBS 118157, E. xenobiotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	NOP7	A0A0D2BDM0	A0A0D2FQ51	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	PV05_00156	A0A0D2BDM0	A0A0D2FIB5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.996
ERB1	PV05_00247	A0A0D2BDM0	A0A0D2C530	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.941
ERB1	PV05_00310	A0A0D2BDM0	A0A0D2FIV3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.779
ERB1	PV05_00311	A0A0D2BDM0	A0A0D2EZH8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.783
ERB1	PV05_00391	A0A0D2BDM0	A0A0D2DCX7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.769
ERB1	PV05_00579	A0A0D2BDM0	A0A0D2EX79	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.997
ERB1	PV05_00750	A0A0D2BDM0	A0A0D2DE40	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosomal protein L24.	0.954
ERB1	PV05_00824	A0A0D2BDM0	A0A0D2C6V2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.745
ERB1	PV05_00847	A0A0D2BDM0	A0A0D2DEB7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Exonuclease domain-containing protein.	0.616
ERB1	PV05_01818	A0A0D2BDM0	A0A0D2F1C1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.477
ERB1	PV05_02197	A0A0D2BDM0	A0A0D2EPW2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.996
ERB1	PV05_02652	A0A0D2BDM0	A0A0D2D715	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein L5.	0.893
ERB1	PV05_02679	A0A0D2BDM0	A0A0D2C073	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.994
ERB1	PV05_02984	A0A0D2BDM0	A0A0D2D885	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.978
ERB1	PV05_03479	A0A0D2BDM0	A0A0D2FFZ1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.923
ERB1	PV05_03513	A0A0D2BDM0	A0A0D2FG30	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein L10-A.	0.689
ERB1	PV05_03762	A0A0D2BDM0	A0A0D2DAE5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.949
ERB1	PV05_03836	A0A0D2BDM0	A0A0D2EUI5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein NSA2.	0.978
ERB1	PV05_04404	A0A0D2BDM0	A0A0D2EJS1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.	0.818